Cluster: MGYG000003980_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003980
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003980_86 | MGYG000003980_86_7 | 4969 | 6306 | + | 3.A.1.121.4 |
| pfam | MGYG000003980_86 | MGYG000003980_86_8 | 6330 | 7289 | + | PseudoU_synth_2 | S4 |
| CAZyme | MGYG000003980_86 | MGYG000003980_86_9 | 7410 | 9017 | + | GT39 |
Gene ID: MGYG000003980_86_7
Type: TC
Location: 4969 - 6306 (+)
Type: TC
Location: 4969 - 6306 (+)
Gene ID: MGYG000003980_86_8
Type: pfam
Location: 6330 - 7289 (+)
Type: pfam
Location: 6330 - 7289 (+)
Gene ID: MGYG000003980_86_9
Type: CAZyme
Location: 7410 - 9017 (+)
Type: CAZyme
Location: 7410 - 9017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905201305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003980_86_9 | vegetarian > omnivore | 1.05474 | 0.03778 |
| MGYG000003980_86_9 | vegetarian > vegan | 2.35998 | 0.00536 |