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Cluster: MGYG000003980_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003980_2 MGYG000003980_2_15 13341 14714 + 2.A.66.1.33
pfam MGYG000003980_2 MGYG000003980_2_16 14707 16068 + MMR_HSR1 | FeoB_N | TrmE_N | MnmE_helical
CAZyme MGYG000003980_2 MGYG000003980_2_17 16119 19394 - GT4
NULL(UNKNOWN) MGYG000003980_2 MGYG000003980_2_18 19398 19817 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000003980_2 MGYG000003980_2_19 19828 20331 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003980_2 MGYG000003980_2_20 20328 22871 - GT4
pfam MGYG000003980_2 MGYG000003980_2_21 23200 24672 + O-antigen_lig
CAZyme MGYG000003980_2 MGYG000003980_2_22 24669 25646 + GT2
Gene ID: MGYG000003980_2_15
Type: TC
Location: 13341 - 14714 (+)
Gene ID: MGYG000003980_2_16
Type: pfam
Location: 14707 - 16068 (+)
Gene ID: MGYG000003980_2_17
Type: CAZyme
Location: 16119 - 19394 (-)
Gene ID: MGYG000003980_2_18
Type:
Location: 19398 - 19817 (-)
Gene ID: MGYG000003980_2_19
Type:
Location: 19828 - 20331 (-)
Gene ID: MGYG000003980_2_20
Type: CAZyme
Location: 20328 - 22871 (-)
Gene ID: MGYG000003980_2_21
Type: pfam
Location: 23200 - 24672 (+)
Gene ID: MGYG000003980_2_22
Type: CAZyme
Location: 24669 - 25646 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003980_2_15 vegetarian > vegan 2.14834 0.00536
MGYG000003980_2_16 vegetarian > vegan 1.25833 0.00536

🧭 Explore Read Mapping of CGC

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