Cluster: MGYG000003956_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003956
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003956_1 | MGYG000003956_1_766 | 833791 | 836235 | + | GT4 |
| TC | MGYG000003956_1 | MGYG000003956_1_767 | 836353 | 838209 | + | 9.B.18.2.1 |
| TC | MGYG000003956_1 | MGYG000003956_1_768 | 838219 | 838866 | + | 9.B.18.1.2 |
| pfam | MGYG000003956_1 | MGYG000003956_1_769 | 838868 | 839752 | + | NTP_transferase | NTP_transf_3 |
| pfam | MGYG000003956_1 | MGYG000003956_1_770 | 839767 | 840783 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_771 | 840785 | 843148 | + | GT4 |
| STP | MGYG000003956_1 | MGYG000003956_1_772 | 843162 | 844310 | + | Fer4 | Fer4 |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_773 | 844325 | 845302 | + | GT2 |
| pfam | MGYG000003956_1 | MGYG000003956_1_774 | 845324 | 846421 | - | PS_pyruv_trans |
| pfam | MGYG000003956_1 | MGYG000003956_1_775 | 846516 | 849866 | + | Wzy_C |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_776 | 849853 | 851094 | + | GT4 |
| pfam | MGYG000003956_1 | MGYG000003956_1_777 | 851103 | 852704 | + | Polysacc_synt |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_778 | 852710 | 854275 | + | GT2 |
Gene ID: MGYG000003956_1_766
Type: CAZyme
Location: 833791 - 836235 (+)
Type: CAZyme
Location: 833791 - 836235 (+)
Gene ID: MGYG000003956_1_767
Type: TC
Location: 836353 - 838209 (+)
Type: TC
Location: 836353 - 838209 (+)
Gene ID: MGYG000003956_1_768
Type: TC
Location: 838219 - 838866 (+)
Type: TC
Location: 838219 - 838866 (+)
Gene ID: MGYG000003956_1_769
Type: pfam
Location: 838868 - 839752 (+)
Type: pfam
Location: 838868 - 839752 (+)
Gene ID: MGYG000003956_1_770
Type: pfam
Location: 839767 - 840783 (+)
Type: pfam
Location: 839767 - 840783 (+)
Gene ID: MGYG000003956_1_771
Type: CAZyme
Location: 840785 - 843148 (+)
Type: CAZyme
Location: 840785 - 843148 (+)
Gene ID: MGYG000003956_1_772
Type: STP
Location: 843162 - 844310 (+)
Type: STP
Location: 843162 - 844310 (+)
Gene ID: MGYG000003956_1_773
Type: CAZyme
Location: 844325 - 845302 (+)
Type: CAZyme
Location: 844325 - 845302 (+)
Gene ID: MGYG000003956_1_774
Type: pfam
Location: 845324 - 846421 (-)
Type: pfam
Location: 845324 - 846421 (-)
Gene ID: MGYG000003956_1_775
Type: pfam
Location: 846516 - 849866 (+)
Type: pfam
Location: 846516 - 849866 (+)
Gene ID: MGYG000003956_1_776
Type: CAZyme
Location: 849853 - 851094 (+)
Type: CAZyme
Location: 849853 - 851094 (+)
Gene ID: MGYG000003956_1_777
Type: pfam
Location: 851103 - 852704 (+)
Type: pfam
Location: 851103 - 852704 (+)
Gene ID: MGYG000003956_1_778
Type: CAZyme
Location: 852710 - 854275 (+)
Type: CAZyme
Location: 852710 - 854275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp900315885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.