Cluster: MGYG000003956_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003956
- CGC Family ID: CGCFAM_00097
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003956_1 | MGYG000003956_1_70 | 84037 | 84975 | + | 3.A.1.1.20 |
| TC | MGYG000003956_1 | MGYG000003956_1_71 | 84988 | 85902 | + | 3.A.1.1.20 |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_72 | 85920 | 88343 | + | GH32 |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_73 | 88336 | 90399 | + | CBM38 | GH32 |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_74 | 90408 | 91874 | + | GH32 |
| CAZyme | MGYG000003956_1 | MGYG000003956_1_75 | 91879 | 94107 | + | CBM38 | CBM38 |
Gene ID: MGYG000003956_1_70
Type: TC
Location: 84037 - 84975 (+)
Type: TC
Location: 84037 - 84975 (+)
Gene ID: MGYG000003956_1_71
Type: TC
Location: 84988 - 85902 (+)
Type: TC
Location: 84988 - 85902 (+)
Gene ID: MGYG000003956_1_72
Type: CAZyme
Location: 85920 - 88343 (+)
Type: CAZyme
Location: 85920 - 88343 (+)
Gene ID: MGYG000003956_1_73
Type: CAZyme
Location: 88336 - 90399 (+)
Type: CAZyme
Location: 88336 - 90399 (+)
Gene ID: MGYG000003956_1_74
Type: CAZyme
Location: 90408 - 91874 (+)
Type: CAZyme
Location: 90408 - 91874 (+)
Gene ID: MGYG000003956_1_75
Type: CAZyme
Location: 91879 - 94107 (+)
Type: CAZyme
Location: 91879 - 94107 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
RUG131
Species
RUG131 sp900315885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.