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Cluster: MGYG000003954_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003954_2 MGYG000003954_2_176 188637 189590 + 2.A.69.3.2
TF MGYG000003954_2 MGYG000003954_2_177 189723 190610 - HTH_AraC | HTH_AraC
CAZyme MGYG000003954_2 MGYG000003954_2_178 190732 192366 + GH13_31
CAZyme MGYG000003954_2 MGYG000003954_2_179 192491 194746 + GT35
TF MGYG000003954_2 MGYG000003954_2_180 194971 196536 + HTH_AraC
pfam MGYG000003954_2 MGYG000003954_2_181 196759 198021 + SBP_bac_8
TC MGYG000003954_2 MGYG000003954_2_182 198109 199488 + 3.A.1.1.27
TC MGYG000003954_2 MGYG000003954_2_183 199490 200377 + 3.A.1.1.27
CAZyme MGYG000003954_2 MGYG000003954_2_184 200442 202124 + GH13_36
CAZyme MGYG000003954_2 MGYG000003954_2_185 202244 204193 + GH133
CAZyme MGYG000003954_2 MGYG000003954_2_186 204226 206124 + GH13_14
TC MGYG000003954_2 MGYG000003954_2_187 206126 207862 + 3.A.1.135.5
TC MGYG000003954_2 MGYG000003954_2_188 207866 209599 + 3.A.1.135.5
Gene ID: MGYG000003954_2_176
Type: TC
Location: 188637 - 189590 (+)
Gene ID: MGYG000003954_2_177
Type: TF
Location: 189723 - 190610 (-)
Gene ID: MGYG000003954_2_178
Type: CAZyme
Location: 190732 - 192366 (+)
Gene ID: MGYG000003954_2_179
Type: CAZyme
Location: 192491 - 194746 (+)
Gene ID: MGYG000003954_2_180
Type: TF
Location: 194971 - 196536 (+)
Gene ID: MGYG000003954_2_181
Type: pfam
Location: 196759 - 198021 (+)
Gene ID: MGYG000003954_2_182
Type: TC
Location: 198109 - 199488 (+)
Gene ID: MGYG000003954_2_183
Type: TC
Location: 199490 - 200377 (+)
Gene ID: MGYG000003954_2_184
Type: CAZyme
Location: 200442 - 202124 (+)
Gene ID: MGYG000003954_2_185
Type: CAZyme
Location: 202244 - 204193 (+)
Gene ID: MGYG000003954_2_186
Type: CAZyme
Location: 204226 - 206124 (+)
Gene ID: MGYG000003954_2_187
Type: TC
Location: 206126 - 207862 (+)
Gene ID: MGYG000003954_2_188
Type: TC
Location: 207866 - 209599 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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