Cluster: MGYG000003954_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003954
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003954_1 | MGYG000003954_1_303 | 342274 | 343203 | - | GT2 |
| pfam | MGYG000003954_1 | MGYG000003954_1_304 | 343213 | 344403 | - | PS_pyruv_trans |
| NULL(UNKNOWN) | MGYG000003954_1 | MGYG000003954_1_305 | 344469 | 344561 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003954_1 | MGYG000003954_1_306 | 345212 | 347080 | - | 9.B.74.1.4 |
| pfam | MGYG000003954_1 | MGYG000003954_1_307 | 347303 | 349378 | - | MMPL | MMPL |
| STP | MGYG000003954_1 | MGYG000003954_1_308 | 349572 | 350174 | + | TetR_N |
| CAZyme | MGYG000003954_1 | MGYG000003954_1_309 | 350280 | 352583 | - | GH13_14 |
| TF | MGYG000003954_1 | MGYG000003954_1_310 | 352838 | 353338 | + | MarR |
| TC | MGYG000003954_1 | MGYG000003954_1_311 | 353332 | 355083 | + | 3.A.1.135.5 |
| TC | MGYG000003954_1 | MGYG000003954_1_312 | 355083 | 356990 | + | 3.A.1.135.5 |
| pfam | MGYG000003954_1 | MGYG000003954_1_313 | 357527 | 358963 | - | GatB_Yqey | GatB_N |
| TC | MGYG000003954_1 | MGYG000003954_1_314 | 358965 | 360410 | - | 3.A.9.1.1 |
Gene ID: MGYG000003954_1_303
Type: CAZyme
Location: 342274 - 343203 (-)
Type: CAZyme
Location: 342274 - 343203 (-)
Gene ID: MGYG000003954_1_304
Type: pfam
Location: 343213 - 344403 (-)
Type: pfam
Location: 343213 - 344403 (-)
Gene ID: MGYG000003954_1_305
Type:
Location: 344469 - 344561 (-)
Type:
Location: 344469 - 344561 (-)
Gene ID: MGYG000003954_1_306
Type: TC
Location: 345212 - 347080 (-)
Type: TC
Location: 345212 - 347080 (-)
Gene ID: MGYG000003954_1_307
Type: pfam
Location: 347303 - 349378 (-)
Type: pfam
Location: 347303 - 349378 (-)
Gene ID: MGYG000003954_1_308
Type: STP
Location: 349572 - 350174 (+)
Type: STP
Location: 349572 - 350174 (+)
Gene ID: MGYG000003954_1_309
Type: CAZyme
Location: 350280 - 352583 (-)
Type: CAZyme
Location: 350280 - 352583 (-)
Gene ID: MGYG000003954_1_310
Type: TF
Location: 352838 - 353338 (+)
Type: TF
Location: 352838 - 353338 (+)
Gene ID: MGYG000003954_1_311
Type: TC
Location: 353332 - 355083 (+)
Type: TC
Location: 353332 - 355083 (+)
Gene ID: MGYG000003954_1_312
Type: TC
Location: 355083 - 356990 (+)
Type: TC
Location: 355083 - 356990 (+)
Gene ID: MGYG000003954_1_313
Type: pfam
Location: 357527 - 358963 (-)
Type: pfam
Location: 357527 - 358963 (-)
Gene ID: MGYG000003954_1_314
Type: TC
Location: 358965 - 360410 (-)
Type: TC
Location: 358965 - 360410 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp900539455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.