Cluster: MGYG000003954_CGC17
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003954
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003954_6 | MGYG000003954_6_29 | 26643 | 27332 | + | 3.A.1.132.8 |
| NULL(UNKNOWN) | MGYG000003954_6 | MGYG000003954_6_30 | 27349 | 28185 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003954_6 | MGYG000003954_6_31 | 28370 | 29842 | - | 1.B.52.2.2 |
| STP | MGYG000003954_6 | MGYG000003954_6_32 | 30125 | 31009 | + | Pyr_redox_2 |
| TC | MGYG000003954_6 | MGYG000003954_6_33 | 31102 | 32646 | + | 3.A.1.3.20 |
| TC | MGYG000003954_6 | MGYG000003954_6_34 | 32636 | 33376 | + | 3.A.1.3.25 |
| TC | MGYG000003954_6 | MGYG000003954_6_35 | 33730 | 35112 | + | 8.A.3.3.4 |
| pfam | MGYG000003954_6 | MGYG000003954_6_36 | 35090 | 35779 | + | CpsB_CapC |
| CAZyme | MGYG000003954_6 | MGYG000003954_6_37 | 35794 | 36774 | + | GT2 |
| CAZyme | MGYG000003954_6 | MGYG000003954_6_38 | 36778 | 37707 | + | GT2 |
| pfam | MGYG000003954_6 | MGYG000003954_6_39 | 37713 | 39086 | + | Wzy_C |
| CAZyme | MGYG000003954_6 | MGYG000003954_6_40 | 39106 | 40104 | + | GT2 |
| CAZyme | MGYG000003954_6 | MGYG000003954_6_41 | 40127 | 41068 | + | GT32 |
| CAZyme | MGYG000003954_6 | MGYG000003954_6_42 | 41132 | 41974 | + | GT32 |
Gene ID: MGYG000003954_6_29
Type: TC
Location: 26643 - 27332 (+)
Type: TC
Location: 26643 - 27332 (+)
Gene ID: MGYG000003954_6_30
Type:
Location: 27349 - 28185 (+)
Type:
Location: 27349 - 28185 (+)
Gene ID: MGYG000003954_6_31
Type: TC
Location: 28370 - 29842 (-)
Type: TC
Location: 28370 - 29842 (-)
Gene ID: MGYG000003954_6_32
Type: STP
Location: 30125 - 31009 (+)
Type: STP
Location: 30125 - 31009 (+)
Gene ID: MGYG000003954_6_33
Type: TC
Location: 31102 - 32646 (+)
Type: TC
Location: 31102 - 32646 (+)
Gene ID: MGYG000003954_6_34
Type: TC
Location: 32636 - 33376 (+)
Type: TC
Location: 32636 - 33376 (+)
Gene ID: MGYG000003954_6_35
Type: TC
Location: 33730 - 35112 (+)
Type: TC
Location: 33730 - 35112 (+)
Gene ID: MGYG000003954_6_36
Type: pfam
Location: 35090 - 35779 (+)
Type: pfam
Location: 35090 - 35779 (+)
Gene ID: MGYG000003954_6_37
Type: CAZyme
Location: 35794 - 36774 (+)
Type: CAZyme
Location: 35794 - 36774 (+)
Gene ID: MGYG000003954_6_38
Type: CAZyme
Location: 36778 - 37707 (+)
Type: CAZyme
Location: 36778 - 37707 (+)
Gene ID: MGYG000003954_6_39
Type: pfam
Location: 37713 - 39086 (+)
Type: pfam
Location: 37713 - 39086 (+)
Gene ID: MGYG000003954_6_40
Type: CAZyme
Location: 39106 - 40104 (+)
Type: CAZyme
Location: 39106 - 40104 (+)
Gene ID: MGYG000003954_6_41
Type: CAZyme
Location: 40127 - 41068 (+)
Type: CAZyme
Location: 40127 - 41068 (+)
Gene ID: MGYG000003954_6_42
Type: CAZyme
Location: 41132 - 41974 (+)
Type: CAZyme
Location: 41132 - 41974 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp900539455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.