Cluster: MGYG000003954_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003954
- CGC Family ID: CGCFAM_00156
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003954_3 | MGYG000003954_3_215 | 244180 | 245238 | - | GT2 |
| pfam | MGYG000003954_3 | MGYG000003954_3_216 | 245444 | 246190 | - | APH |
| pfam | MGYG000003954_3 | MGYG000003954_3_217 | 246344 | 246865 | - | Gate |
| CAZyme | MGYG000003954_3 | MGYG000003954_3_218 | 246987 | 247898 | - | CE4 |
| pfam | MGYG000003954_3 | MGYG000003954_3_219 | 248192 | 248971 | - | PHP |
| TC | MGYG000003954_3 | MGYG000003954_3_220 | 248973 | 250793 | - | 3.A.1.120.6 |
Gene ID: MGYG000003954_3_215
Type: CAZyme
Location: 244180 - 245238 (-)
Type: CAZyme
Location: 244180 - 245238 (-)
Gene ID: MGYG000003954_3_216
Type: pfam
Location: 245444 - 246190 (-)
Type: pfam
Location: 245444 - 246190 (-)
Gene ID: MGYG000003954_3_217
Type: pfam
Location: 246344 - 246865 (-)
Type: pfam
Location: 246344 - 246865 (-)
Gene ID: MGYG000003954_3_218
Type: CAZyme
Location: 246987 - 247898 (-)
Type: CAZyme
Location: 246987 - 247898 (-)
Gene ID: MGYG000003954_3_219
Type: pfam
Location: 248192 - 248971 (-)
Type: pfam
Location: 248192 - 248971 (-)
Gene ID: MGYG000003954_3_220
Type: TC
Location: 248973 - 250793 (-)
Type: TC
Location: 248973 - 250793 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp900539455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.