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Cluster: MGYG000003954_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003954_3 MGYG000003954_3_17 18600 19700 - GT28
NULL(UNKNOWN) MGYG000003954_3 MGYG000003954_3_18 19831 19986 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000003954_3 MGYG000003954_3_19 19962 20399 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003954_3 MGYG000003954_3_20 20490 23111 - 3.A.3.2.21
TC MGYG000003954_3 MGYG000003954_3_21 23599 24210 - 9.B.31.1.1
pfam MGYG000003954_3 MGYG000003954_3_22 24301 25119 - CN_hydrolase
TC MGYG000003954_3 MGYG000003954_3_23 25173 27749 - 3.A.3.5.15
STP MGYG000003954_3 MGYG000003954_3_24 28425 28676 - HMA
TC MGYG000003954_3 MGYG000003954_3_25 28804 30453 - 3.A.1.106.11
TC MGYG000003954_3 MGYG000003954_3_26 30453 31151 - 3.A.1.201.18
TC MGYG000003954_3 MGYG000003954_3_27 31090 32175 - 3.A.1.106.12
Gene ID: MGYG000003954_3_17
Type: CAZyme
Location: 18600 - 19700 (-)
Gene ID: MGYG000003954_3_18
Type:
Location: 19831 - 19986 (+)
Gene ID: MGYG000003954_3_19
Type:
Location: 19962 - 20399 (+)
Gene ID: MGYG000003954_3_20
Type: TC
Location: 20490 - 23111 (-)
Gene ID: MGYG000003954_3_21
Type: TC
Location: 23599 - 24210 (-)
Gene ID: MGYG000003954_3_22
Type: pfam
Location: 24301 - 25119 (-)
Gene ID: MGYG000003954_3_23
Type: TC
Location: 25173 - 27749 (-)
Gene ID: MGYG000003954_3_24
Type: STP
Location: 28425 - 28676 (-)
Gene ID: MGYG000003954_3_25
Type: TC
Location: 28804 - 30453 (-)
Gene ID: MGYG000003954_3_26
Type: TC
Location: 30453 - 31151 (-)
Gene ID: MGYG000003954_3_27
Type: TC
Location: 31090 - 32175 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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