Cluster: MGYG000003933_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003933
- CGC Family ID: CGCFAM_03259
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003933_3 | MGYG000003933_3_179 | 228014 | 229921 | - | 2.A.53.3.4 |
| NULL(UNKNOWN) | MGYG000003933_3 | MGYG000003933_3_180 | 229924 | 231045 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003933_3 | MGYG000003933_3_181 | 231501 | 232745 | + | GH23 |
| pfam | MGYG000003933_3 | MGYG000003933_3_182 | 232901 | 233464 | + | OmpH |
| TC | MGYG000003933_3 | MGYG000003933_3_183 | 233789 | 234772 | + | 2.A.69.3.2 |
Gene ID: MGYG000003933_3_179
Type: TC
Location: 228014 - 229921 (-)
Type: TC
Location: 228014 - 229921 (-)
Gene ID: MGYG000003933_3_180
Type:
Location: 229924 - 231045 (-)
Type:
Location: 229924 - 231045 (-)
Gene ID: MGYG000003933_3_181
Type: CAZyme
Location: 231501 - 232745 (+)
Type: CAZyme
Location: 231501 - 232745 (+)
Gene ID: MGYG000003933_3_182
Type: pfam
Location: 232901 - 233464 (+)
Type: pfam
Location: 232901 - 233464 (+)
Gene ID: MGYG000003933_3_183
Type: TC
Location: 233789 - 234772 (+)
Type: TC
Location: 233789 - 234772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio desulfuricans_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.