Cluster: MGYG000003933_CGC6
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003933
- CGC Family ID: CGCFAM_06059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003933_2 | MGYG000003933_2_71 | 87967 | 89775 | - | 1.B.52.2.1 |
| pfam | MGYG000003933_2 | MGYG000003933_2_72 | 90285 | 91340 | + | ADH_zinc_N | ADH_N | ADH_zinc_N_2 |
| TC | MGYG000003933_2 | MGYG000003933_2_73 | 91456 | 92745 | - | 2.A.56.1.2 |
| TC | MGYG000003933_2 | MGYG000003933_2_74 | 92755 | 93315 | - | 2.A.56.1.2 |
| TC | MGYG000003933_2 | MGYG000003933_2_75 | 93517 | 94521 | - | 2.A.56.1.6 |
| STP | MGYG000003933_2 | MGYG000003933_2_76 | 95277 | 96374 | - | Fer4 | Fer4 |
| STP | MGYG000003933_2 | MGYG000003933_2_77 | 96590 | 97216 | + | Pribosyltran |
| TC | MGYG000003933_2 | MGYG000003933_2_78 | 97227 | 98486 | + | 2.A.40.1.4 |
| TC | MGYG000003933_2 | MGYG000003933_2_79 | 99164 | 100426 | + | 9.B.34.1.3 |
| TF | MGYG000003933_2 | MGYG000003933_2_80 | 100586 | 101545 | - | HTH_1 |
| pfam | MGYG000003933_2 | MGYG000003933_2_81 | 101644 | 102393 | + | adh_short | KR | adh_short_C2 |
| TC | MGYG000003933_2 | MGYG000003933_2_82 | 102475 | 103692 | + | 2.A.1.36.3 |
| CAZyme | MGYG000003933_2 | MGYG000003933_2_83 | 104129 | 106669 | + | GT4 |
| NULL(UNKNOWN) | MGYG000003933_2 | MGYG000003933_2_84 | 106809 | 107030 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003933_2 | MGYG000003933_2_85 | 107279 | 108430 | - | 8.A.59.4.1 |
| CAZyme | MGYG000003933_2 | MGYG000003933_2_86 | 108768 | 109826 | + | CE4 |
Gene ID: MGYG000003933_2_71
Type: TC
Location: 87967 - 89775 (-)
Type: TC
Location: 87967 - 89775 (-)
Gene ID: MGYG000003933_2_72
Type: pfam
Location: 90285 - 91340 (+)
Type: pfam
Location: 90285 - 91340 (+)
Gene ID: MGYG000003933_2_73
Type: TC
Location: 91456 - 92745 (-)
Type: TC
Location: 91456 - 92745 (-)
Gene ID: MGYG000003933_2_74
Type: TC
Location: 92755 - 93315 (-)
Type: TC
Location: 92755 - 93315 (-)
Gene ID: MGYG000003933_2_75
Type: TC
Location: 93517 - 94521 (-)
Type: TC
Location: 93517 - 94521 (-)
Gene ID: MGYG000003933_2_76
Type: STP
Location: 95277 - 96374 (-)
Type: STP
Location: 95277 - 96374 (-)
Gene ID: MGYG000003933_2_77
Type: STP
Location: 96590 - 97216 (+)
Type: STP
Location: 96590 - 97216 (+)
Gene ID: MGYG000003933_2_78
Type: TC
Location: 97227 - 98486 (+)
Type: TC
Location: 97227 - 98486 (+)
Gene ID: MGYG000003933_2_79
Type: TC
Location: 99164 - 100426 (+)
Type: TC
Location: 99164 - 100426 (+)
Gene ID: MGYG000003933_2_80
Type: TF
Location: 100586 - 101545 (-)
Type: TF
Location: 100586 - 101545 (-)
Gene ID: MGYG000003933_2_81
Type: pfam
Location: 101644 - 102393 (+)
Type: pfam
Location: 101644 - 102393 (+)
Gene ID: MGYG000003933_2_82
Type: TC
Location: 102475 - 103692 (+)
Type: TC
Location: 102475 - 103692 (+)
Gene ID: MGYG000003933_2_83
Type: CAZyme
Location: 104129 - 106669 (+)
Type: CAZyme
Location: 104129 - 106669 (+)
Gene ID: MGYG000003933_2_84
Type:
Location: 106809 - 107030 (-)
Type:
Location: 106809 - 107030 (-)
Gene ID: MGYG000003933_2_85
Type: TC
Location: 107279 - 108430 (-)
Type: TC
Location: 107279 - 108430 (-)
Gene ID: MGYG000003933_2_86
Type: CAZyme
Location: 108768 - 109826 (+)
Type: CAZyme
Location: 108768 - 109826 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio desulfuricans_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.