Cluster: MGYG000003933_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003933
- CGC Family ID: CGCFAM_02315
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003933_13 | MGYG000003933_13_20 | 21134 | 22003 | - | 2.A.7.28.11 |
| pfam | MGYG000003933_13 | MGYG000003933_13_21 | 22027 | 22794 | - | Phosphodiest |
| NULL(UNKNOWN) | MGYG000003933_13 | MGYG000003933_13_22 | 22794 | 23819 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003933_13 | MGYG000003933_13_23 | 24048 | 25139 | + | GT4 |
| NULL(UNKNOWN) | MGYG000003933_13 | MGYG000003933_13_24 | 25325 | 25810 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003933_13 | MGYG000003933_13_25 | 25953 | 27140 | + | GT21 |
| TC | MGYG000003933_13 | MGYG000003933_13_26 | 27401 | 28591 | + | 3.A.1.122.1 |
| CAZyme | MGYG000003933_13 | MGYG000003933_13_27 | 28653 | 30638 | + | GT4 |
Gene ID: MGYG000003933_13_20
Type: TC
Location: 21134 - 22003 (-)
Type: TC
Location: 21134 - 22003 (-)
Gene ID: MGYG000003933_13_21
Type: pfam
Location: 22027 - 22794 (-)
Type: pfam
Location: 22027 - 22794 (-)
Gene ID: MGYG000003933_13_22
Type:
Location: 22794 - 23819 (-)
Type:
Location: 22794 - 23819 (-)
Gene ID: MGYG000003933_13_23
Type: CAZyme
Location: 24048 - 25139 (+)
Type: CAZyme
Location: 24048 - 25139 (+)
Gene ID: MGYG000003933_13_24
Type:
Location: 25325 - 25810 (+)
Type:
Location: 25325 - 25810 (+)
Gene ID: MGYG000003933_13_25
Type: CAZyme
Location: 25953 - 27140 (+)
Type: CAZyme
Location: 25953 - 27140 (+)
Gene ID: MGYG000003933_13_26
Type: TC
Location: 27401 - 28591 (+)
Type: TC
Location: 27401 - 28591 (+)
Gene ID: MGYG000003933_13_27
Type: CAZyme
Location: 28653 - 30638 (+)
Type: CAZyme
Location: 28653 - 30638 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio desulfuricans_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.