Cluster: MGYG000003933_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003933
- CGC Family ID: CGCFAM_03342
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003933_4 | MGYG000003933_4_184 | 188597 | 189997 | + | 3.A.1.109.4 |
| TC | MGYG000003933_4 | MGYG000003933_4_185 | 190220 | 192583 | + | 3.A.1.109.3 |
| TC | MGYG000003933_4 | MGYG000003933_4_186 | 192657 | 194618 | + | 3.A.1.109.4 |
| STP | MGYG000003933_4 | MGYG000003933_4_187 | 194780 | 196915 | + | PAS |
| pfam | MGYG000003933_4 | MGYG000003933_4_188 | 196934 | 197473 | + | Glyco_trans_4_3 |
| CAZyme | MGYG000003933_4 | MGYG000003933_4_189 | 197479 | 198210 | + | GT4 |
Gene ID: MGYG000003933_4_184
Type: TC
Location: 188597 - 189997 (+)
Type: TC
Location: 188597 - 189997 (+)
Gene ID: MGYG000003933_4_185
Type: TC
Location: 190220 - 192583 (+)
Type: TC
Location: 190220 - 192583 (+)
Gene ID: MGYG000003933_4_186
Type: TC
Location: 192657 - 194618 (+)
Type: TC
Location: 192657 - 194618 (+)
Gene ID: MGYG000003933_4_187
Type: STP
Location: 194780 - 196915 (+)
Type: STP
Location: 194780 - 196915 (+)
Gene ID: MGYG000003933_4_188
Type: pfam
Location: 196934 - 197473 (+)
Type: pfam
Location: 196934 - 197473 (+)
Gene ID: MGYG000003933_4_189
Type: CAZyme
Location: 197479 - 198210 (+)
Type: CAZyme
Location: 197479 - 198210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio desulfuricans_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.