Cluster: MGYG000003931_CGC9
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003931
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003931_10 | MGYG000003931_10_10 | 15120 | 18161 | - | GH3 |
| pfam | MGYG000003931_10 | MGYG000003931_10_11 | 18352 | 19719 | - | HATPase_c_5 |
| TF | MGYG000003931_10 | MGYG000003931_10_12 | 19721 | 20431 | - | LytTR |
| TC | MGYG000003931_10 | MGYG000003931_10_13 | 20582 | 22072 | - | 2.A.45.2.6 |
| pfam | MGYG000003931_10 | MGYG000003931_10_14 | 22187 | 22639 | - | AhpC-TSA | Redoxin |
| NULL(UNKNOWN) | MGYG000003931_10 | MGYG000003931_10_15 | 22819 | 24660 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003931_10 | MGYG000003931_10_16 | 24677 | 28180 | - | GH3 |
| TC | MGYG000003931_10 | MGYG000003931_10_17 | 28502 | 29275 | - | 3.A.1.14.13 |
| TC | MGYG000003931_10 | MGYG000003931_10_18 | 29262 | 30287 | - | 3.A.1.14.22 |
| TC | MGYG000003931_10 | MGYG000003931_10_19 | 30284 | 31225 | - | 3.A.1.14.17 |
Gene ID: MGYG000003931_10_10
Type: CAZyme
Location: 15120 - 18161 (-)
Type: CAZyme
Location: 15120 - 18161 (-)
Gene ID: MGYG000003931_10_11
Type: pfam
Location: 18352 - 19719 (-)
Type: pfam
Location: 18352 - 19719 (-)
Gene ID: MGYG000003931_10_12
Type: TF
Location: 19721 - 20431 (-)
Type: TF
Location: 19721 - 20431 (-)
Gene ID: MGYG000003931_10_13
Type: TC
Location: 20582 - 22072 (-)
Type: TC
Location: 20582 - 22072 (-)
Gene ID: MGYG000003931_10_14
Type: pfam
Location: 22187 - 22639 (-)
Type: pfam
Location: 22187 - 22639 (-)
Gene ID: MGYG000003931_10_15
Type:
Location: 22819 - 24660 (-)
Type:
Location: 22819 - 24660 (-)
Gene ID: MGYG000003931_10_16
Type: CAZyme
Location: 24677 - 28180 (-)
Type: CAZyme
Location: 24677 - 28180 (-)
Gene ID: MGYG000003931_10_17
Type: TC
Location: 28502 - 29275 (-)
Type: TC
Location: 28502 - 29275 (-)
Gene ID: MGYG000003931_10_18
Type: TC
Location: 29262 - 30287 (-)
Type: TC
Location: 29262 - 30287 (-)
Gene ID: MGYG000003931_10_19
Type: TC
Location: 30284 - 31225 (-)
Type: TC
Location: 30284 - 31225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp019113265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.