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Cluster: MGYG000003929_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003929_5 MGYG000003929_5_47 47978 48676 + 3.A.1.122.14
TC MGYG000003929_5 MGYG000003929_5_48 48633 49541 + 3.A.1.122.14
pfam MGYG000003929_5 MGYG000003929_5_49 49822 50652 + PRD | PRD | CAT_RBD
TC MGYG000003929_5 MGYG000003929_5_50 50873 52747 + 4.A.1.2.6
CAZyme MGYG000003929_5 MGYG000003929_5_51 53067 54509 + GH1
pfam MGYG000003929_5 MGYG000003929_5_52 54591 55424 + Hydrolase_3
TF MGYG000003929_5 MGYG000003929_5_53 55554 56417 + HTH_6
TC MGYG000003929_5 MGYG000003929_5_54 56720 58600 + 4.A.1.2.2
CAZyme MGYG000003929_5 MGYG000003929_5_55 58868 60313 + GH1
Gene ID: MGYG000003929_5_47
Type: TC
Location: 47978 - 48676 (+)
Gene ID: MGYG000003929_5_48
Type: TC
Location: 48633 - 49541 (+)
Gene ID: MGYG000003929_5_49
Type: pfam
Location: 49822 - 50652 (+)
Gene ID: MGYG000003929_5_50
Type: TC
Location: 50873 - 52747 (+)
Gene ID: MGYG000003929_5_51
Type: CAZyme
Location: 53067 - 54509 (+)
Gene ID: MGYG000003929_5_52
Type: pfam
Location: 54591 - 55424 (+)
Gene ID: MGYG000003929_5_53
Type: TF
Location: 55554 - 56417 (+)
Gene ID: MGYG000003929_5_54
Type: TC
Location: 56720 - 58600 (+)
Gene ID: MGYG000003929_5_55
Type: CAZyme
Location: 58868 - 60313 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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