Cluster: MGYG000003927_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003927
- CGC Family ID: CGCFAM_07282
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003927_53 | MGYG000003927_53_1 | 3 | 440 | + | 2.A.66.1.28 |
| pfam | MGYG000003927_53 | MGYG000003927_53_2 | 509 | 1939 | - | SLFN_AlbA_2 | HATPase_c_4 |
| CAZyme | MGYG000003927_53 | MGYG000003927_53_3 | 2354 | 5128 | + | GH3 |
| TF | MGYG000003927_53 | MGYG000003927_53_4 | 5115 | 5807 | - | 0038753 |
| TF | MGYG000003927_53 | MGYG000003927_53_5 | 5985 | 6392 | + | MarR |
| TC | MGYG000003927_53 | MGYG000003927_53_6 | 6418 | 7071 | + | 2.A.115.2.8 |
Gene ID: MGYG000003927_53_1
Type: TC
Location: 3 - 440 (+)
Type: TC
Location: 3 - 440 (+)
Gene ID: MGYG000003927_53_2
Type: pfam
Location: 509 - 1939 (-)
Type: pfam
Location: 509 - 1939 (-)
Gene ID: MGYG000003927_53_3
Type: CAZyme
Location: 2354 - 5128 (+)
Type: CAZyme
Location: 2354 - 5128 (+)
Gene ID: MGYG000003927_53_4
Type: TF
Location: 5115 - 5807 (-)
Type: TF
Location: 5115 - 5807 (-)
Gene ID: MGYG000003927_53_5
Type: TF
Location: 5985 - 6392 (+)
Type: TF
Location: 5985 - 6392 (+)
Gene ID: MGYG000003927_53_6
Type: TC
Location: 6418 - 7071 (+)
Type: TC
Location: 6418 - 7071 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp902490585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.