Cluster: MGYG000003927_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003927
- CGC Family ID: CGCFAM_04065
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003927_21 | MGYG000003927_21_18 | 13838 | 14530 | + | 1.C.82.1.1 |
| NULL(UNKNOWN) | MGYG000003927_21 | MGYG000003927_21_19 | 14733 | 15395 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003927_21 | MGYG000003927_21_20 | 15443 | 16618 | - | GH130_1 |
| NULL(UNKNOWN) | MGYG000003927_21 | MGYG000003927_21_21 | 16754 | 17353 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003927_21 | MGYG000003927_21_22 | 17381 | 17941 | - | 1.A.22.1.1 |
| pfam | MGYG000003927_21 | MGYG000003927_21_23 | 17969 | 20155 | - | S1 | RNB | OB_RNB |
| TC | MGYG000003927_21 | MGYG000003927_21_24 | 20645 | 21274 | + | 2.A.87.1.3 |
Gene ID: MGYG000003927_21_18
Type: TC
Location: 13838 - 14530 (+)
Type: TC
Location: 13838 - 14530 (+)
Gene ID: MGYG000003927_21_19
Type:
Location: 14733 - 15395 (-)
Type:
Location: 14733 - 15395 (-)
Gene ID: MGYG000003927_21_20
Type: CAZyme
Location: 15443 - 16618 (-)
Type: CAZyme
Location: 15443 - 16618 (-)
Gene ID: MGYG000003927_21_21
Type:
Location: 16754 - 17353 (-)
Type:
Location: 16754 - 17353 (-)
Gene ID: MGYG000003927_21_22
Type: TC
Location: 17381 - 17941 (-)
Type: TC
Location: 17381 - 17941 (-)
Gene ID: MGYG000003927_21_23
Type: pfam
Location: 17969 - 20155 (-)
Type: pfam
Location: 17969 - 20155 (-)
Gene ID: MGYG000003927_21_24
Type: TC
Location: 20645 - 21274 (+)
Type: TC
Location: 20645 - 21274 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp902490585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.