Cluster: MGYG000003927_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003927
- CGC Family ID: CGCFAM_10143
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003927_20 | MGYG000003927_20_5 | 2427 | 3500 | - | CE2 |
| pfam | MGYG000003927_20 | MGYG000003927_20_6 | 3674 | 4366 | - | DUF4367 |
| STP | MGYG000003927_20 | MGYG000003927_20_7 | 4353 | 4892 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | MGYG000003927_20 | MGYG000003927_20_8 | 5055 | 7031 | - | 1.B.52.2.1 |
| STP | MGYG000003927_20 | MGYG000003927_20_9 | 7321 | 7806 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | MGYG000003927_20 | MGYG000003927_20_10 | 7803 | 8885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003927_20 | MGYG000003927_20_11 | 9121 | 11502 | - | 9.A.8.1.6 |
Gene ID: MGYG000003927_20_5
Type: CAZyme
Location: 2427 - 3500 (-)
Type: CAZyme
Location: 2427 - 3500 (-)
Gene ID: MGYG000003927_20_6
Type: pfam
Location: 3674 - 4366 (-)
Type: pfam
Location: 3674 - 4366 (-)
Gene ID: MGYG000003927_20_7
Type: STP
Location: 4353 - 4892 (-)
Type: STP
Location: 4353 - 4892 (-)
Gene ID: MGYG000003927_20_8
Type: TC
Location: 5055 - 7031 (-)
Type: TC
Location: 5055 - 7031 (-)
Gene ID: MGYG000003927_20_9
Type: STP
Location: 7321 - 7806 (+)
Type: STP
Location: 7321 - 7806 (+)
Gene ID: MGYG000003927_20_10
Type:
Location: 7803 - 8885 (+)
Type:
Location: 7803 - 8885 (+)
Gene ID: MGYG000003927_20_11
Type: TC
Location: 9121 - 11502 (-)
Type: TC
Location: 9121 - 11502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp902490585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.