Cluster: MGYG000003927_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003927
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003927_19 | MGYG000003927_19_9 | 9221 | 10402 | - | GH5_4 |
| TF | MGYG000003927_19 | MGYG000003927_19_10 | 10415 | 11209 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003927_19 | MGYG000003927_19_11 | 11235 | 12587 | - | GH43_35 |
| pfam | MGYG000003927_19 | MGYG000003927_19_12 | 12927 | 13337 | + | Pep_deformylase |
| TC | MGYG000003927_19 | MGYG000003927_19_13 | 13392 | 14441 | - | 3.A.1.17.3 |
| TC | MGYG000003927_19 | MGYG000003927_19_14 | 14443 | 15186 | - | 3.A.1.17.13 |
| TC | MGYG000003927_19 | MGYG000003927_19_15 | 15183 | 15959 | - | 3.A.1.17.8 |
Gene ID: MGYG000003927_19_9
Type: CAZyme
Location: 9221 - 10402 (-)
Type: CAZyme
Location: 9221 - 10402 (-)
Gene ID: MGYG000003927_19_10
Type: TF
Location: 10415 - 11209 (-)
Type: TF
Location: 10415 - 11209 (-)
Gene ID: MGYG000003927_19_11
Type: CAZyme
Location: 11235 - 12587 (-)
Type: CAZyme
Location: 11235 - 12587 (-)
Gene ID: MGYG000003927_19_12
Type: pfam
Location: 12927 - 13337 (+)
Type: pfam
Location: 12927 - 13337 (+)
Gene ID: MGYG000003927_19_13
Type: TC
Location: 13392 - 14441 (-)
Type: TC
Location: 13392 - 14441 (-)
Gene ID: MGYG000003927_19_14
Type: TC
Location: 14443 - 15186 (-)
Type: TC
Location: 14443 - 15186 (-)
Gene ID: MGYG000003927_19_15
Type: TC
Location: 15183 - 15959 (-)
Type: TC
Location: 15183 - 15959 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp902490585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.