Cluster: MGYG000003922_CGC40
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate: pectin/host glycan
- Genome ID: MGYG000003922
- CGC Family ID: CGCFAM_00110
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003922_33 | MGYG000003922_33_1 | 76 | 2805 | - | GH16_3 | GH29 |
| CAZyme | MGYG000003922_33 | MGYG000003922_33_2 | 2822 | 4456 | - | GH33 |
| CAZyme | MGYG000003922_33 | MGYG000003922_33_3 | 4468 | 7527 | - | GH2 |
| CAZyme | MGYG000003922_33 | MGYG000003922_33_4 | 7546 | 9861 | - | GH20 |
| sulfatase | MGYG000003922_33 | MGYG000003922_33_5 | 9894 | 11471 | - | S1_11 |
| CAZyme | MGYG000003922_33 | MGYG000003922_33_6 | 11611 | 13932 | - | GH20 |
| pfam | MGYG000003922_33 | MGYG000003922_33_7 | 14049 | 15965 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003922_33 | MGYG000003922_33_8 | 15981 | 19268 | - | 1.B.14.6.1 |
Gene ID: MGYG000003922_33_1
Type: CAZyme
Location: 76 - 2805 (-)
Type: CAZyme
Location: 76 - 2805 (-)
Gene ID: MGYG000003922_33_2
Type: CAZyme
Location: 2822 - 4456 (-)
Type: CAZyme
Location: 2822 - 4456 (-)
Gene ID: MGYG000003922_33_3
Type: CAZyme
Location: 4468 - 7527 (-)
Type: CAZyme
Location: 4468 - 7527 (-)
Gene ID: MGYG000003922_33_4
Type: CAZyme
Location: 7546 - 9861 (-)
Type: CAZyme
Location: 7546 - 9861 (-)
Gene ID: MGYG000003922_33_5
Type: sulfatase
Location: 9894 - 11471 (-)
Type: sulfatase
Location: 9894 - 11471 (-)
Gene ID: MGYG000003922_33_6
Type: CAZyme
Location: 11611 - 13932 (-)
Type: CAZyme
Location: 11611 - 13932 (-)
Gene ID: MGYG000003922_33_7
Type: pfam
Location: 14049 - 15965 (-)
Type: pfam
Location: 14049 - 15965 (-)
Gene ID: MGYG000003922_33_8
Type: TC
Location: 15981 - 19268 (-)
Type: TC
Location: 15981 - 19268 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides laotingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.