Cluster: MGYG000003922_CGC4
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 9
- Substrate: xylan
- Genome ID: MGYG000003922
- CGC Family ID: CGCFAM_06385
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003922_3 | MGYG000003922_3_92 | 129284 | 130411 | - | GH43 |
| sulfatase | MGYG000003922_3 | MGYG000003922_3_93 | 130435 | 131910 | - | S1_27 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_94 | 131955 | 134153 | - | GH2 |
| sulfatase | MGYG000003922_3 | MGYG000003922_3_95 | 134346 | 135875 | - | S1_15 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_96 | 136040 | 139663 | - | GH38 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_97 | 139681 | 141477 | - | GH2 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_98 | 141522 | 143555 | - | GH127 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_99 | 143570 | 145633 | - | GH127 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_100 | 145846 | 146925 | + | GH43_26 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_101 | 146958 | 148052 | + | GH43_26 |
| pfam | MGYG000003922_3 | MGYG000003922_3_102 | 148132 | 148836 | - | DUF3823 | DUF3823_C |
| pfam | MGYG000003922_3 | MGYG000003922_3_103 | 148856 | 150733 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003922_3 | MGYG000003922_3_104 | 150741 | 153971 | - | 1.B.14.6.1 |
| sulfatase | MGYG000003922_3 | MGYG000003922_3_105 | 154006 | 156528 | - | S1_4 |
| CAZyme | MGYG000003922_3 | MGYG000003922_3_106 | 157689 | 159620 | + | GH43_34 | GH76 |
| sulfatase | MGYG000003922_3 | MGYG000003922_3_107 | 159671 | 162151 | + | S1_4 |
| sulfatase | MGYG000003922_3 | MGYG000003922_3_108 | 162175 | 163305 | + | S1_22 |
| TC | MGYG000003922_3 | MGYG000003922_3_109 | 163306 | 164493 | + | 9.B.169.1.7 |
| peptidase | MGYG000003922_3 | MGYG000003922_3_110 | 164682 | 165749 | - | M20.016 |
| TC | MGYG000003922_3 | MGYG000003922_3_111 | 165839 | 167647 | + | 4.C.1.1.14 |
Gene ID: MGYG000003922_3_92
Type: CAZyme
Location: 129284 - 130411 (-)
Type: CAZyme
Location: 129284 - 130411 (-)
Gene ID: MGYG000003922_3_93
Type: sulfatase
Location: 130435 - 131910 (-)
Type: sulfatase
Location: 130435 - 131910 (-)
Gene ID: MGYG000003922_3_94
Type: CAZyme
Location: 131955 - 134153 (-)
Type: CAZyme
Location: 131955 - 134153 (-)
Gene ID: MGYG000003922_3_95
Type: sulfatase
Location: 134346 - 135875 (-)
Type: sulfatase
Location: 134346 - 135875 (-)
Gene ID: MGYG000003922_3_96
Type: CAZyme
Location: 136040 - 139663 (-)
Type: CAZyme
Location: 136040 - 139663 (-)
Gene ID: MGYG000003922_3_97
Type: CAZyme
Location: 139681 - 141477 (-)
Type: CAZyme
Location: 139681 - 141477 (-)
Gene ID: MGYG000003922_3_98
Type: CAZyme
Location: 141522 - 143555 (-)
Type: CAZyme
Location: 141522 - 143555 (-)
Gene ID: MGYG000003922_3_99
Type: CAZyme
Location: 143570 - 145633 (-)
Type: CAZyme
Location: 143570 - 145633 (-)
Gene ID: MGYG000003922_3_100
Type: CAZyme
Location: 145846 - 146925 (+)
Type: CAZyme
Location: 145846 - 146925 (+)
Gene ID: MGYG000003922_3_101
Type: CAZyme
Location: 146958 - 148052 (+)
Type: CAZyme
Location: 146958 - 148052 (+)
Gene ID: MGYG000003922_3_102
Type: pfam
Location: 148132 - 148836 (-)
Type: pfam
Location: 148132 - 148836 (-)
Gene ID: MGYG000003922_3_103
Type: pfam
Location: 148856 - 150733 (-)
Type: pfam
Location: 148856 - 150733 (-)
Gene ID: MGYG000003922_3_104
Type: TC
Location: 150741 - 153971 (-)
Type: TC
Location: 150741 - 153971 (-)
Gene ID: MGYG000003922_3_105
Type: sulfatase
Location: 154006 - 156528 (-)
Type: sulfatase
Location: 154006 - 156528 (-)
Gene ID: MGYG000003922_3_106
Type: CAZyme
Location: 157689 - 159620 (+)
Type: CAZyme
Location: 157689 - 159620 (+)
Gene ID: MGYG000003922_3_107
Type: sulfatase
Location: 159671 - 162151 (+)
Type: sulfatase
Location: 159671 - 162151 (+)
Gene ID: MGYG000003922_3_108
Type: sulfatase
Location: 162175 - 163305 (+)
Type: sulfatase
Location: 162175 - 163305 (+)
Gene ID: MGYG000003922_3_109
Type: TC
Location: 163306 - 164493 (+)
Type: TC
Location: 163306 - 164493 (+)
Gene ID: MGYG000003922_3_110
Type: peptidase
Location: 164682 - 165749 (-)
Type: peptidase
Location: 164682 - 165749 (-)
Gene ID: MGYG000003922_3_111
Type: TC
Location: 165839 - 167647 (+)
Type: TC
Location: 165839 - 167647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides laotingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.