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Cluster: MGYG000003922_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003922_28 MGYG000003922_28_3 1605 3005 + 2.A.1.3.17
CAZyme MGYG000003922_28 MGYG000003922_28_4 3562 5436 + GH2
pfam MGYG000003922_28 MGYG000003922_28_5 5515 7350 + Por_Secre_tail
TC MGYG000003922_28 MGYG000003922_28_6 7459 10602 + 1.B.14.6.1
TC MGYG000003922_28 MGYG000003922_28_7 10621 12300 + 8.A.46.1.3
NULL(UNKNOWN) MGYG000003922_28 MGYG000003922_28_8 12324 13301 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003922_28 MGYG000003922_28_9 13323 15284 + GH93
TF MGYG000003922_28 MGYG000003922_28_10 15614 19642 + HTH_AraC
CAZyme MGYG000003922_28 MGYG000003922_28_11 19686 22673 + CBM67 | GH78
Gene ID: MGYG000003922_28_3
Type: TC
Location: 1605 - 3005 (+)
Gene ID: MGYG000003922_28_4
Type: CAZyme
Location: 3562 - 5436 (+)
Gene ID: MGYG000003922_28_5
Type: pfam
Location: 5515 - 7350 (+)
Gene ID: MGYG000003922_28_6
Type: TC
Location: 7459 - 10602 (+)
Gene ID: MGYG000003922_28_7
Type: TC
Location: 10621 - 12300 (+)
Gene ID: MGYG000003922_28_8
Type:
Location: 12324 - 13301 (+)
Gene ID: MGYG000003922_28_9
Type: CAZyme
Location: 13323 - 15284 (+)
Gene ID: MGYG000003922_28_10
Type: TF
Location: 15614 - 19642 (+)
Gene ID: MGYG000003922_28_11
Type: CAZyme
Location: 19686 - 22673 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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