Cluster: MGYG000003922_CGC31
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003922
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003922_21 | MGYG000003922_21_15 | 19184 | 20992 | - | CBM91 | GH43_10 |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_16 | 21329 | 24265 | - | CBM32 | GH2 |
| TC | MGYG000003922_21 | MGYG000003922_21_17 | 24969 | 28055 | + | 1.B.14.6.1 |
| TC | MGYG000003922_21 | MGYG000003922_21_18 | 28075 | 29658 | + | 8.A.46.1.6 |
| pfam | MGYG000003922_21 | MGYG000003922_21_19 | 29768 | 31573 | + | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_20 | 31570 | 33939 | + | GH36 |
| pfam | MGYG000003922_21 | MGYG000003922_21_21 | 34640 | 35581 | + | PDDEXK_2 |
| NULL(UNKNOWN) | MGYG000003922_21 | MGYG000003922_21_22 | 35617 | 35709 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_23 | 35709 | 38168 | - | GH95 |
| TF | MGYG000003922_21 | MGYG000003922_21_24 | 38344 | 42372 | + | HTH_AraC |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_25 | 42535 | 44520 | + | CE20 | CE20 |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_26 | 44673 | 46829 | + | GH36 |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_27 | 46882 | 49071 | + | GH92 |
| pfam | MGYG000003922_21 | MGYG000003922_21_28 | 49199 | 51541 | - | Topoisom_bac | Topoisom_bac | Toprim | Toprim_C_rpt | Toprim_C_rpt | Toprim_C_rpt |
| CAZyme | MGYG000003922_21 | MGYG000003922_21_29 | 51781 | 54735 | + | GH115 |
Gene ID: MGYG000003922_21_15
Type: CAZyme
Location: 19184 - 20992 (-)
Type: CAZyme
Location: 19184 - 20992 (-)
Gene ID: MGYG000003922_21_16
Type: CAZyme
Location: 21329 - 24265 (-)
Type: CAZyme
Location: 21329 - 24265 (-)
Gene ID: MGYG000003922_21_17
Type: TC
Location: 24969 - 28055 (+)
Type: TC
Location: 24969 - 28055 (+)
Gene ID: MGYG000003922_21_18
Type: TC
Location: 28075 - 29658 (+)
Type: TC
Location: 28075 - 29658 (+)
Gene ID: MGYG000003922_21_19
Type: pfam
Location: 29768 - 31573 (+)
Type: pfam
Location: 29768 - 31573 (+)
Gene ID: MGYG000003922_21_20
Type: CAZyme
Location: 31570 - 33939 (+)
Type: CAZyme
Location: 31570 - 33939 (+)
Gene ID: MGYG000003922_21_21
Type: pfam
Location: 34640 - 35581 (+)
Type: pfam
Location: 34640 - 35581 (+)
Gene ID: MGYG000003922_21_22
Type:
Location: 35617 - 35709 (-)
Type:
Location: 35617 - 35709 (-)
Gene ID: MGYG000003922_21_23
Type: CAZyme
Location: 35709 - 38168 (-)
Type: CAZyme
Location: 35709 - 38168 (-)
Gene ID: MGYG000003922_21_24
Type: TF
Location: 38344 - 42372 (+)
Type: TF
Location: 38344 - 42372 (+)
Gene ID: MGYG000003922_21_25
Type: CAZyme
Location: 42535 - 44520 (+)
Type: CAZyme
Location: 42535 - 44520 (+)
Gene ID: MGYG000003922_21_26
Type: CAZyme
Location: 44673 - 46829 (+)
Type: CAZyme
Location: 44673 - 46829 (+)
Gene ID: MGYG000003922_21_27
Type: CAZyme
Location: 46882 - 49071 (+)
Type: CAZyme
Location: 46882 - 49071 (+)
Gene ID: MGYG000003922_21_28
Type: pfam
Location: 49199 - 51541 (-)
Type: pfam
Location: 49199 - 51541 (-)
Gene ID: MGYG000003922_21_29
Type: CAZyme
Location: 51781 - 54735 (+)
Type: CAZyme
Location: 51781 - 54735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides laotingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.