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Cluster: MGYG000003922_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003922_8 MGYG000003922_8_46 62809 64104 + GH23
STP MGYG000003922_8 MGYG000003922_8_47 64173 66422 + HD
TF MGYG000003922_8 MGYG000003922_8_48 66437 66784 - MerR
TC MGYG000003922_8 MGYG000003922_8_49 66795 67763 - 1.A.34.1.3
pfam MGYG000003922_8 MGYG000003922_8_50 67818 70487 + tRNA-synt_2c | DHHA1 | tRNA_SAD
pfam MGYG000003922_8 MGYG000003922_8_51 70875 72023 + OmpA
CAZyme MGYG000003922_8 MGYG000003922_8_52 72612 74849 + GH92
TF MGYG000003922_8 MGYG000003922_8_53 74868 75422 + GerE
STP MGYG000003922_8 MGYG000003922_8_54 75473 76474 + FecR
CAZyme MGYG000003922_8 MGYG000003922_8_55 76536 78815 + GH92
Gene ID: MGYG000003922_8_46
Type: CAZyme
Location: 62809 - 64104 (+)
Gene ID: MGYG000003922_8_47
Type: STP
Location: 64173 - 66422 (+)
Gene ID: MGYG000003922_8_48
Type: TF
Location: 66437 - 66784 (-)
Gene ID: MGYG000003922_8_49
Type: TC
Location: 66795 - 67763 (-)
Gene ID: MGYG000003922_8_50
Type: pfam
Location: 67818 - 70487 (+)
Gene ID: MGYG000003922_8_51
Type: pfam
Location: 70875 - 72023 (+)
Gene ID: MGYG000003922_8_52
Type: CAZyme
Location: 72612 - 74849 (+)
Gene ID: MGYG000003922_8_53
Type: TF
Location: 74868 - 75422 (+)
Gene ID: MGYG000003922_8_54
Type: STP
Location: 75473 - 76474 (+)
Gene ID: MGYG000003922_8_55
Type: CAZyme
Location: 76536 - 78815 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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