Cluster: MGYG000003922_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: pectin
- Genome ID: MGYG000003922
- CGC Family ID: CGCFAM_00079
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003922_7 | MGYG000003922_7_35 | 40112 | 43165 | + | 1.B.14.6.1 |
| TC | MGYG000003922_7 | MGYG000003922_7_36 | 43216 | 44802 | + | 8.A.46.1.3 |
| CAZyme | MGYG000003922_7 | MGYG000003922_7_37 | 44833 | 47223 | + | GH3 |
| CAZyme | MGYG000003922_7 | MGYG000003922_7_38 | 47505 | 48854 | + | GH144 |
| NULL(UNKNOWN) | MGYG000003922_7 | MGYG000003922_7_39 | 48851 | 48964 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003922_7 | MGYG000003922_7_40 | 49084 | 50904 | - | GH2 |
| CAZyme | MGYG000003922_7 | MGYG000003922_7_41 | 51030 | 51992 | - | GH43_18 |
Gene ID: MGYG000003922_7_35
Type: TC
Location: 40112 - 43165 (+)
Type: TC
Location: 40112 - 43165 (+)
Gene ID: MGYG000003922_7_36
Type: TC
Location: 43216 - 44802 (+)
Type: TC
Location: 43216 - 44802 (+)
Gene ID: MGYG000003922_7_37
Type: CAZyme
Location: 44833 - 47223 (+)
Type: CAZyme
Location: 44833 - 47223 (+)
Gene ID: MGYG000003922_7_38
Type: CAZyme
Location: 47505 - 48854 (+)
Type: CAZyme
Location: 47505 - 48854 (+)
Gene ID: MGYG000003922_7_39
Type:
Location: 48851 - 48964 (+)
Type:
Location: 48851 - 48964 (+)
Gene ID: MGYG000003922_7_40
Type: CAZyme
Location: 49084 - 50904 (-)
Type: CAZyme
Location: 49084 - 50904 (-)
Gene ID: MGYG000003922_7_41
Type: CAZyme
Location: 51030 - 51992 (-)
Type: CAZyme
Location: 51030 - 51992 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides laotingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.