Cluster: MGYG000003920_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003920
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003920_35 | MGYG000003920_35_3 | 2936 | 5263 | - | 9.A.8.1.6 |
| TC | MGYG000003920_35 | MGYG000003920_35_4 | 5389 | 5610 | - | 9.A.8.1.6 |
| STP | MGYG000003920_35 | MGYG000003920_35_5 | 5647 | 5889 | - | FeoA |
| STP | MGYG000003920_35 | MGYG000003920_35_6 | 6079 | 6327 | - | PTS-HPr |
| TC | MGYG000003920_35 | MGYG000003920_35_7 | 6749 | 8212 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000003920_35 | MGYG000003920_35_8 | 8366 | 8821 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003920_35 | MGYG000003920_35_9 | 8825 | 11833 | - | GH2 |
Gene ID: MGYG000003920_35_3
Type: TC
Location: 2936 - 5263 (-)
Type: TC
Location: 2936 - 5263 (-)
Gene ID: MGYG000003920_35_4
Type: TC
Location: 5389 - 5610 (-)
Type: TC
Location: 5389 - 5610 (-)
Gene ID: MGYG000003920_35_5
Type: STP
Location: 5647 - 5889 (-)
Type: STP
Location: 5647 - 5889 (-)
Gene ID: MGYG000003920_35_6
Type: STP
Location: 6079 - 6327 (-)
Type: STP
Location: 6079 - 6327 (-)
Gene ID: MGYG000003920_35_7
Type: TC
Location: 6749 - 8212 (-)
Type: TC
Location: 6749 - 8212 (-)
Gene ID: MGYG000003920_35_8
Type:
Location: 8366 - 8821 (-)
Type:
Location: 8366 - 8821 (-)
Gene ID: MGYG000003920_35_9
Type: CAZyme
Location: 8825 - 11833 (-)
Type: CAZyme
Location: 8825 - 11833 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902490445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.