Cluster: MGYG000003920_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003920
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003920_13 | MGYG000003920_13_4 | 2502 | 3878 | - | GH13_20 |
| TC | MGYG000003920_13 | MGYG000003920_13_5 | 4032 | 5228 | - | 2.A.1.2.18 |
| TC | MGYG000003920_13 | MGYG000003920_13_6 | 5351 | 7711 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000003920_13 | MGYG000003920_13_7 | 7833 | 8153 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003920_13 | MGYG000003920_13_8 | 8615 | 10078 | - | 2.A.3.2.3 |
Gene ID: MGYG000003920_13_4
Type: CAZyme
Location: 2502 - 3878 (-)
Type: CAZyme
Location: 2502 - 3878 (-)
Gene ID: MGYG000003920_13_5
Type: TC
Location: 4032 - 5228 (-)
Type: TC
Location: 4032 - 5228 (-)
Gene ID: MGYG000003920_13_6
Type: TC
Location: 5351 - 7711 (-)
Type: TC
Location: 5351 - 7711 (-)
Gene ID: MGYG000003920_13_7
Type:
Location: 7833 - 8153 (-)
Type:
Location: 7833 - 8153 (-)
Gene ID: MGYG000003920_13_8
Type: TC
Location: 8615 - 10078 (-)
Type: TC
Location: 8615 - 10078 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902490445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003920_13_8 | vegan > omnivore | 1.56659 | 0.00863 |