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Cluster: MGYG000003920_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003920_69 MGYG000003920_69_1 202 645 + 4.A.6.1.16
pfam MGYG000003920_69 MGYG000003920_69_2 645 926 + YajC
TC MGYG000003920_69 MGYG000003920_69_3 963 1445 + 4.A.6.1.4
TC MGYG000003920_69 MGYG000003920_69_4 1535 2335 + 4.A.6.1.4
TC MGYG000003920_69 MGYG000003920_69_5 2325 3407 + 4.A.6.1.4
TF MGYG000003920_69 MGYG000003920_69_6 3593 4324 + GntR
STP MGYG000003920_69 MGYG000003920_69_7 4439 5605 + SIS | SIS
CAZyme MGYG000003920_69 MGYG000003920_69_8 5723 6892 + CE9
Gene ID: MGYG000003920_69_1
Type: TC
Location: 202 - 645 (+)
Gene ID: MGYG000003920_69_2
Type: pfam
Location: 645 - 926 (+)
Gene ID: MGYG000003920_69_3
Type: TC
Location: 963 - 1445 (+)
Gene ID: MGYG000003920_69_4
Type: TC
Location: 1535 - 2335 (+)
Gene ID: MGYG000003920_69_5
Type: TC
Location: 2325 - 3407 (+)
Gene ID: MGYG000003920_69_6
Type: TF
Location: 3593 - 4324 (+)
Gene ID: MGYG000003920_69_7
Type: STP
Location: 4439 - 5605 (+)
Gene ID: MGYG000003920_69_8
Type: CAZyme
Location: 5723 - 6892 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003920_69_2 vegan > omnivore 1.17842 0.00863
MGYG000003920_69_6 vegan > omnivore 1.02499 0.00863

🧭 Explore Read Mapping of CGC

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