Cluster: MGYG000003913_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003913
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003913_1 | MGYG000003913_1_86 | 102926 | 103462 | - | 4.A.1.2.6 |
| CAZyme | MGYG000003913_1 | MGYG000003913_1_87 | 103603 | 105051 | - | GH1 |
| TF | MGYG000003913_1 | MGYG000003913_1_88 | 105219 | 106211 | - | 0035607 |
| CAZyme | MGYG000003913_1 | MGYG000003913_1_89 | 106326 | 108917 | + | GH106 |
| TF | MGYG000003913_1 | MGYG000003913_1_90 | 109082 | 109936 | + | HTH_6 |
| CAZyme | MGYG000003913_1 | MGYG000003913_1_91 | 110087 | 111400 | - | GH140 |
| TC | MGYG000003913_1 | MGYG000003913_1_92 | 111609 | 113036 | - | 4.A.1.2.11 |
Gene ID: MGYG000003913_1_86
Type: TC
Location: 102926 - 103462 (-)
Type: TC
Location: 102926 - 103462 (-)
Gene ID: MGYG000003913_1_87
Type: CAZyme
Location: 103603 - 105051 (-)
Type: CAZyme
Location: 103603 - 105051 (-)
Gene ID: MGYG000003913_1_88
Type: TF
Location: 105219 - 106211 (-)
Type: TF
Location: 105219 - 106211 (-)
Gene ID: MGYG000003913_1_89
Type: CAZyme
Location: 106326 - 108917 (+)
Type: CAZyme
Location: 106326 - 108917 (+)
Gene ID: MGYG000003913_1_90
Type: TF
Location: 109082 - 109936 (+)
Type: TF
Location: 109082 - 109936 (+)
Gene ID: MGYG000003913_1_91
Type: CAZyme
Location: 110087 - 111400 (-)
Type: CAZyme
Location: 110087 - 111400 (-)
Gene ID: MGYG000003913_1_92
Type: TC
Location: 111609 - 113036 (-)
Type: TC
Location: 111609 - 113036 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902490405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.