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Cluster: MGYG000003909_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003909_39 MGYG000003909_39_12 8566 9480 + 2.A.85.4.3
TC MGYG000003909_39 MGYG000003909_39_13 9510 10910 + 2.A.22.5.3
TF MGYG000003909_39 MGYG000003909_39_14 11049 11897 + HTH_AraC | HTH_AraC
pfam MGYG000003909_39 MGYG000003909_39_15 12081 13100 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme MGYG000003909_39 MGYG000003909_39_16 13161 14276 - CE9
STP MGYG000003909_39 MGYG000003909_39_17 14409 14666 - PTS-HPr
NULL(UNKNOWN) MGYG000003909_39 MGYG000003909_39_18 15080 15430 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003909_39 MGYG000003909_39_19 15799 17184 + 2.A.38.1.1
TC MGYG000003909_39 MGYG000003909_39_20 17181 18626 + 2.A.38.1.1
Gene ID: MGYG000003909_39_12
Type: TC
Location: 8566 - 9480 (+)
Gene ID: MGYG000003909_39_13
Type: TC
Location: 9510 - 10910 (+)
Gene ID: MGYG000003909_39_14
Type: TF
Location: 11049 - 11897 (+)
Gene ID: MGYG000003909_39_15
Type: pfam
Location: 12081 - 13100 (+)
Gene ID: MGYG000003909_39_16
Type: CAZyme
Location: 13161 - 14276 (-)
Gene ID: MGYG000003909_39_17
Type: STP
Location: 14409 - 14666 (-)
Gene ID: MGYG000003909_39_18
Type:
Location: 15080 - 15430 (+)
Gene ID: MGYG000003909_39_19
Type: TC
Location: 15799 - 17184 (+)
Gene ID: MGYG000003909_39_20
Type: TC
Location: 17181 - 18626 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003909_39_14 vegan > omnivore 1.32222 0.00455
MGYG000003909_39_14 vegetarian > omnivore 1.23333 0.00560

🧭 Explore Read Mapping of CGC

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