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Cluster: MGYG000003906_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003906_3 MGYG000003906_3_21 19377 20546 - CE9
STP MGYG000003906_3 MGYG000003906_3_22 20664 21830 - SIS | SIS
TF MGYG000003906_3 MGYG000003906_3_23 21945 22676 - GntR
TC MGYG000003906_3 MGYG000003906_3_24 22862 23944 - 4.A.6.1.4
TC MGYG000003906_3 MGYG000003906_3_25 23934 24734 - 4.A.6.1.4
TC MGYG000003906_3 MGYG000003906_3_26 24825 25307 - 4.A.6.1.4
pfam MGYG000003906_3 MGYG000003906_3_27 25344 25625 - YajC
TC MGYG000003906_3 MGYG000003906_3_28 25625 26068 - 4.A.6.1.16
Gene ID: MGYG000003906_3_21
Type: CAZyme
Location: 19377 - 20546 (-)
Gene ID: MGYG000003906_3_22
Type: STP
Location: 20664 - 21830 (-)
Gene ID: MGYG000003906_3_23
Type: TF
Location: 21945 - 22676 (-)
Gene ID: MGYG000003906_3_24
Type: TC
Location: 22862 - 23944 (-)
Gene ID: MGYG000003906_3_25
Type: TC
Location: 23934 - 24734 (-)
Gene ID: MGYG000003906_3_26
Type: TC
Location: 24825 - 25307 (-)
Gene ID: MGYG000003906_3_27
Type: pfam
Location: 25344 - 25625 (-)
Gene ID: MGYG000003906_3_28
Type: TC
Location: 25625 - 26068 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003906_3_27 vegan > omnivore 1.06969 0.00863

🧭 Explore Read Mapping of CGC

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