Cluster: MGYG000003885_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003885
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003885_14 | MGYG000003885_14_9 | 12859 | 14097 | - | GH105 |
| pfam | MGYG000003885_14 | MGYG000003885_14_10 | 14205 | 14876 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000003885_14 | MGYG000003885_14_11 | 14955 | 17117 | - | CE19 | CE8 |
| peptidase | MGYG000003885_14 | MGYG000003885_14_12 | 17114 | 17923 | - | S09.UPW |
| CAZyme | MGYG000003885_14 | MGYG000003885_14_13 | 18028 | 19623 | - | GH28 |
| TC | MGYG000003885_14 | MGYG000003885_14_14 | 19648 | 21297 | - | 2.A.2.5.1 |
Gene ID: MGYG000003885_14_9
Type: CAZyme
Location: 12859 - 14097 (-)
Type: CAZyme
Location: 12859 - 14097 (-)
Gene ID: MGYG000003885_14_10
Type: pfam
Location: 14205 - 14876 (-)
Type: pfam
Location: 14205 - 14876 (-)
Gene ID: MGYG000003885_14_11
Type: CAZyme
Location: 14955 - 17117 (-)
Type: CAZyme
Location: 14955 - 17117 (-)
Gene ID: MGYG000003885_14_12
Type: peptidase
Location: 17114 - 17923 (-)
Type: peptidase
Location: 17114 - 17923 (-)
Gene ID: MGYG000003885_14_13
Type: CAZyme
Location: 18028 - 19623 (-)
Type: CAZyme
Location: 18028 - 19623 (-)
Gene ID: MGYG000003885_14_14
Type: TC
Location: 19648 - 21297 (-)
Type: TC
Location: 19648 - 21297 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902490095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.