Cluster: MGYG000003880_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: MGYG000003880
- CGC Family ID: CGCFAM_00001
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003880_2 | MGYG000003880_2_256 | 281810 | 284083 | - | GH3 |
| CAZyme | MGYG000003880_2 | MGYG000003880_2_257 | 284257 | 285435 | - | CE1 |
| pfam | MGYG000003880_2 | MGYG000003880_2_258 | 285446 | 287041 | - | Sde182_NH-like | Sde0182_C |
| pfam | MGYG000003880_2 | MGYG000003880_2_259 | 287049 | 288605 | - | Sde182_NH-like | Sde0182_C |
| CAZyme | MGYG000003880_2 | MGYG000003880_2_260 | 288626 | 289813 | - | CE1 |
| pfam | MGYG000003880_2 | MGYG000003880_2_261 | 289878 | 291434 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003880_2 | MGYG000003880_2_262 | 291454 | 294495 | - | 1.B.14.6.1 |
Gene ID: MGYG000003880_2_256
Type: CAZyme
Location: 281810 - 284083 (-)
Type: CAZyme
Location: 281810 - 284083 (-)
Gene ID: MGYG000003880_2_257
Type: CAZyme
Location: 284257 - 285435 (-)
Type: CAZyme
Location: 284257 - 285435 (-)
Gene ID: MGYG000003880_2_258
Type: pfam
Location: 285446 - 287041 (-)
Type: pfam
Location: 285446 - 287041 (-)
Gene ID: MGYG000003880_2_259
Type: pfam
Location: 287049 - 288605 (-)
Type: pfam
Location: 287049 - 288605 (-)
Gene ID: MGYG000003880_2_260
Type: CAZyme
Location: 288626 - 289813 (-)
Type: CAZyme
Location: 288626 - 289813 (-)
Gene ID: MGYG000003880_2_261
Type: pfam
Location: 289878 - 291434 (-)
Type: pfam
Location: 289878 - 291434 (-)
Gene ID: MGYG000003880_2_262
Type: TC
Location: 291454 - 294495 (-)
Type: TC
Location: 291454 - 294495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.