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Cluster: MGYG000003880_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003880_8 MGYG000003880_8_34 42622 43653 + 3.D.6.1.3
TC MGYG000003880_8 MGYG000003880_8_35 43646 45019 + 3.D.6.1.2
TC MGYG000003880_8 MGYG000003880_8_36 45032 46015 + 3.D.6.1.2
TC MGYG000003880_8 MGYG000003880_8_37 46046 46591 + 3.D.6.1.2
TC MGYG000003880_8 MGYG000003880_8_38 46566 47168 + 3.D.6.1.2
TC MGYG000003880_8 MGYG000003880_8_39 47175 47780 + 3.D.6.1.2
NULL(UNKNOWN) MGYG000003880_8 MGYG000003880_8_40 47822 48253 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003880_8 MGYG000003880_8_41 48814 51906 + 1.B.14.6.1
pfam MGYG000003880_8 MGYG000003880_8_42 51932 53764 + SusD_RagB | SusD-like_3
peptidase MGYG000003880_8 MGYG000003880_8_43 53779 54654 + S09.UPW
CAZyme MGYG000003880_8 MGYG000003880_8_44 54749 56476 - GH32
NULL(UNKNOWN) MGYG000003880_8 MGYG000003880_8_45 56463 57797 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003880_8 MGYG000003880_8_46 57831 59678 - SusD_RagB | SusD-like_3
TC MGYG000003880_8 MGYG000003880_8_47 59720 62671 - 1.B.14.6.1
TF MGYG000003880_8 MGYG000003880_8_48 62859 64112 - HTH_AraC | HTH_AraC
TC MGYG000003880_8 MGYG000003880_8_49 64076 65632 - 3.A.1.2.14
TC MGYG000003880_8 MGYG000003880_8_50 65805 66959 + 2.A.1.7.17
Gene ID: MGYG000003880_8_34
Type: TC
Location: 42622 - 43653 (+)
Gene ID: MGYG000003880_8_35
Type: TC
Location: 43646 - 45019 (+)
Gene ID: MGYG000003880_8_36
Type: TC
Location: 45032 - 46015 (+)
Gene ID: MGYG000003880_8_37
Type: TC
Location: 46046 - 46591 (+)
Gene ID: MGYG000003880_8_38
Type: TC
Location: 46566 - 47168 (+)
Gene ID: MGYG000003880_8_39
Type: TC
Location: 47175 - 47780 (+)
Gene ID: MGYG000003880_8_40
Type:
Location: 47822 - 48253 (+)
Gene ID: MGYG000003880_8_41
Type: TC
Location: 48814 - 51906 (+)
Gene ID: MGYG000003880_8_42
Type: pfam
Location: 51932 - 53764 (+)
Gene ID: MGYG000003880_8_43
Type: peptidase
Location: 53779 - 54654 (+)
Gene ID: MGYG000003880_8_44
Type: CAZyme
Location: 54749 - 56476 (-)
Gene ID: MGYG000003880_8_45
Type:
Location: 56463 - 57797 (-)
Gene ID: MGYG000003880_8_46
Type: pfam
Location: 57831 - 59678 (-)
Gene ID: MGYG000003880_8_47
Type: TC
Location: 59720 - 62671 (-)
Gene ID: MGYG000003880_8_48
Type: TF
Location: 62859 - 64112 (-)
Gene ID: MGYG000003880_8_49
Type: TC
Location: 64076 - 65632 (-)
Gene ID: MGYG000003880_8_50
Type: TC
Location: 65805 - 66959 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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