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Cluster: MGYG000003880_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003880_4 MGYG000003880_4_49 50528 52090 + 3.B.1.1.2
pfam MGYG000003880_4 MGYG000003880_4_50 52071 52487 + OAD_gamma
pfam MGYG000003880_4 MGYG000003880_4_51 52484 52918 + Biotin_lipoyl
TC MGYG000003880_4 MGYG000003880_4_52 52918 54063 + 3.B.1.1.3
NULL(UNKNOWN) MGYG000003880_4 MGYG000003880_4_53 54290 54895 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003880_4 MGYG000003880_4_54 54897 55505 + DUF2764
TC MGYG000003880_4 MGYG000003880_4_55 55502 57244 + 3.A.2.3.3
TC MGYG000003880_4 MGYG000003880_4_56 57248 58570 + 3.A.2.3.3
pfam MGYG000003880_4 MGYG000003880_4_57 58574 59179 + ATP-synt_D
TC MGYG000003880_4 MGYG000003880_4_58 59176 60900 + 3.A.2.3.3
pfam MGYG000003880_4 MGYG000003880_4_59 60934 61359 + ATP-synt_C | ATP-synt_C
CAZyme MGYG000003880_4 MGYG000003880_4_60 61975 63264 - GH13_38
Gene ID: MGYG000003880_4_49
Type: TC
Location: 50528 - 52090 (+)
Gene ID: MGYG000003880_4_50
Type: pfam
Location: 52071 - 52487 (+)
Gene ID: MGYG000003880_4_51
Type: pfam
Location: 52484 - 52918 (+)
Gene ID: MGYG000003880_4_52
Type: TC
Location: 52918 - 54063 (+)
Gene ID: MGYG000003880_4_53
Type:
Location: 54290 - 54895 (+)
Gene ID: MGYG000003880_4_54
Type: pfam
Location: 54897 - 55505 (+)
Gene ID: MGYG000003880_4_55
Type: TC
Location: 55502 - 57244 (+)
Gene ID: MGYG000003880_4_56
Type: TC
Location: 57248 - 58570 (+)
Gene ID: MGYG000003880_4_57
Type: pfam
Location: 58574 - 59179 (+)
Gene ID: MGYG000003880_4_58
Type: TC
Location: 59176 - 60900 (+)
Gene ID: MGYG000003880_4_59
Type: pfam
Location: 60934 - 61359 (+)
Gene ID: MGYG000003880_4_60
Type: CAZyme
Location: 61975 - 63264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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