Cluster: MGYG000003880_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003880
- CGC Family ID: CGCFAM_00128
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003880_3 | MGYG000003880_3_109 | 98903 | 100018 | - | 8.A.59.2.1 |
| TC | MGYG000003880_3 | MGYG000003880_3_110 | 100161 | 101498 | + | 2.A.2.6.2 |
| TC | MGYG000003880_3 | MGYG000003880_3_111 | 101540 | 104551 | + | 1.B.14.6.1 |
| pfam | MGYG000003880_3 | MGYG000003880_3_112 | 104564 | 106231 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003880_3 | MGYG000003880_3_113 | 106249 | 108087 | + | SusE |
| CAZyme | MGYG000003880_3 | MGYG000003880_3_114 | 108123 | 110465 | + | GH13_36 |
| CAZyme | MGYG000003880_3 | MGYG000003880_3_115 | 110474 | 113461 | + | GH13 | GH13_46 |
| CAZyme | MGYG000003880_3 | MGYG000003880_3_116 | 113458 | 115632 | + | GH97 |
| CAZyme | MGYG000003880_3 | MGYG000003880_3_117 | 115729 | 117594 | + | GH77 |
| pfam | MGYG000003880_3 | MGYG000003880_3_118 | 117767 | 118711 | - | FloA |
| pfam | MGYG000003880_3 | MGYG000003880_3_119 | 118713 | 119180 | - | NfeD | NfeD_membrane |
| TC | MGYG000003880_3 | MGYG000003880_3_120 | 119301 | 122369 | + | 2.A.6.4.3 |
Gene ID: MGYG000003880_3_109
Type: TC
Location: 98903 - 100018 (-)
Type: TC
Location: 98903 - 100018 (-)
Gene ID: MGYG000003880_3_110
Type: TC
Location: 100161 - 101498 (+)
Type: TC
Location: 100161 - 101498 (+)
Gene ID: MGYG000003880_3_111
Type: TC
Location: 101540 - 104551 (+)
Type: TC
Location: 101540 - 104551 (+)
Gene ID: MGYG000003880_3_112
Type: pfam
Location: 104564 - 106231 (+)
Type: pfam
Location: 104564 - 106231 (+)
Gene ID: MGYG000003880_3_113
Type: pfam
Location: 106249 - 108087 (+)
Type: pfam
Location: 106249 - 108087 (+)
Gene ID: MGYG000003880_3_114
Type: CAZyme
Location: 108123 - 110465 (+)
Type: CAZyme
Location: 108123 - 110465 (+)
Gene ID: MGYG000003880_3_115
Type: CAZyme
Location: 110474 - 113461 (+)
Type: CAZyme
Location: 110474 - 113461 (+)
Gene ID: MGYG000003880_3_116
Type: CAZyme
Location: 113458 - 115632 (+)
Type: CAZyme
Location: 113458 - 115632 (+)
Gene ID: MGYG000003880_3_117
Type: CAZyme
Location: 115729 - 117594 (+)
Type: CAZyme
Location: 115729 - 117594 (+)
Gene ID: MGYG000003880_3_118
Type: pfam
Location: 117767 - 118711 (-)
Type: pfam
Location: 117767 - 118711 (-)
Gene ID: MGYG000003880_3_119
Type: pfam
Location: 118713 - 119180 (-)
Type: pfam
Location: 118713 - 119180 (-)
Gene ID: MGYG000003880_3_120
Type: TC
Location: 119301 - 122369 (+)
Type: TC
Location: 119301 - 122369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.