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Cluster: MGYG000003873_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003873_35 MGYG000003873_35_8 7133 8302 - CE9
STP MGYG000003873_35 MGYG000003873_35_9 8421 9587 - SIS | SIS
TF MGYG000003873_35 MGYG000003873_35_10 9702 10433 - GntR
TC MGYG000003873_35 MGYG000003873_35_11 10619 11701 - 4.A.6.1.4
TC MGYG000003873_35 MGYG000003873_35_12 11691 12491 - 4.A.6.1.4
TC MGYG000003873_35 MGYG000003873_35_13 12582 13064 - 4.A.6.1.4
pfam MGYG000003873_35 MGYG000003873_35_14 13101 13382 - YajC
TC MGYG000003873_35 MGYG000003873_35_15 13382 13825 - 4.A.6.1.16
Gene ID: MGYG000003873_35_8
Type: CAZyme
Location: 7133 - 8302 (-)
Gene ID: MGYG000003873_35_9
Type: STP
Location: 8421 - 9587 (-)
Gene ID: MGYG000003873_35_10
Type: TF
Location: 9702 - 10433 (-)
Gene ID: MGYG000003873_35_11
Type: TC
Location: 10619 - 11701 (-)
Gene ID: MGYG000003873_35_12
Type: TC
Location: 11691 - 12491 (-)
Gene ID: MGYG000003873_35_13
Type: TC
Location: 12582 - 13064 (-)
Gene ID: MGYG000003873_35_14
Type: pfam
Location: 13101 - 13382 (-)
Gene ID: MGYG000003873_35_15
Type: TC
Location: 13382 - 13825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003873_35_14 vegan > omnivore 1.01689 0.00863

🧭 Explore Read Mapping of CGC

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