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Cluster: MGYG000003857_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003857_1 MGYG000003857_1_16 13293 14894 + 2.A.3.3.22
TC MGYG000003857_1 MGYG000003857_1_17 14881 16479 + 2.A.3.3.22
TC MGYG000003857_1 MGYG000003857_1_18 16469 18082 + 2.A.3.3.22
pfam MGYG000003857_1 MGYG000003857_1_19 18130 18531 - C_GCAxxG_C_C
NULL(UNKNOWN) MGYG000003857_1 MGYG000003857_1_20 18668 19912 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003857_1 MGYG000003857_1_21 19934 21154 + GT2
CAZyme MGYG000003857_1 MGYG000003857_1_22 21154 22404 + GT2
CAZyme MGYG000003857_1 MGYG000003857_1_23 22397 25786 + GT2 | GT2
TC MGYG000003857_1 MGYG000003857_1_24 25833 28208 - 9.A.8.1.6
Gene ID: MGYG000003857_1_16
Type: TC
Location: 13293 - 14894 (+)
Gene ID: MGYG000003857_1_17
Type: TC
Location: 14881 - 16479 (+)
Gene ID: MGYG000003857_1_18
Type: TC
Location: 16469 - 18082 (+)
Gene ID: MGYG000003857_1_19
Type: pfam
Location: 18130 - 18531 (-)
Gene ID: MGYG000003857_1_20
Type:
Location: 18668 - 19912 (+)
Gene ID: MGYG000003857_1_21
Type: CAZyme
Location: 19934 - 21154 (+)
Gene ID: MGYG000003857_1_22
Type: CAZyme
Location: 21154 - 22404 (+)
Gene ID: MGYG000003857_1_23
Type: CAZyme
Location: 22397 - 25786 (+)
Gene ID: MGYG000003857_1_24
Type: TC
Location: 25833 - 28208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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