Cluster: MGYG000003845_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003845
- CGC Family ID: CGCFAM_08494
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003845_39 | MGYG000003845_39_3 | 1680 | 2843 | + | 2.A.1.7.17 |
| NULL(UNKNOWN) | MGYG000003845_39 | MGYG000003845_39_4 | 2849 | 3181 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003845_39 | MGYG000003845_39_5 | 3208 | 3474 | - | MtN3_slv | PQ-loop |
| CAZyme | MGYG000003845_39 | MGYG000003845_39_6 | 3714 | 4787 | - | GT2 |
| CAZyme | MGYG000003845_39 | MGYG000003845_39_7 | 4803 | 6806 | - | GT111 | GT8 |
Gene ID: MGYG000003845_39_3
Type: TC
Location: 1680 - 2843 (+)
Type: TC
Location: 1680 - 2843 (+)
Gene ID: MGYG000003845_39_4
Type:
Location: 2849 - 3181 (+)
Type:
Location: 2849 - 3181 (+)
Gene ID: MGYG000003845_39_5
Type: pfam
Location: 3208 - 3474 (-)
Type: pfam
Location: 3208 - 3474 (-)
Gene ID: MGYG000003845_39_6
Type: CAZyme
Location: 3714 - 4787 (-)
Type: CAZyme
Location: 3714 - 4787 (-)
Gene ID: MGYG000003845_39_7
Type: CAZyme
Location: 4803 - 6806 (-)
Type: CAZyme
Location: 4803 - 6806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.