Cluster: MGYG000003838_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003838
- CGC Family ID: CGCFAM_01315
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003838_1 | MGYG000003838_1_310 | 343153 | 345435 | + | 3.A.9.1.2 |
| TC | MGYG000003838_1 | MGYG000003838_1_311 | 346391 | 347569 | + | 2.A.1.60.3 |
| CAZyme | MGYG000003838_1 | MGYG000003838_1_312 | 347681 | 348625 | + | GH179 |
| TF | MGYG000003838_1 | MGYG000003838_1_313 | 349032 | 349907 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003838_1 | MGYG000003838_1_314 | 350066 | 351547 | + | GH4 |
Gene ID: MGYG000003838_1_310
Type: TC
Location: 343153 - 345435 (+)
Type: TC
Location: 343153 - 345435 (+)
Gene ID: MGYG000003838_1_311
Type: TC
Location: 346391 - 347569 (+)
Type: TC
Location: 346391 - 347569 (+)
Gene ID: MGYG000003838_1_312
Type: CAZyme
Location: 347681 - 348625 (+)
Type: CAZyme
Location: 347681 - 348625 (+)
Gene ID: MGYG000003838_1_313
Type: TF
Location: 349032 - 349907 (-)
Type: TF
Location: 349032 - 349907 (-)
Gene ID: MGYG000003838_1_314
Type: CAZyme
Location: 350066 - 351547 (+)
Type: CAZyme
Location: 350066 - 351547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Metaruminococcus_A
Species
Metaruminococcus_A sp003150405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.