Cluster: MGYG000003838_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003838
- CGC Family ID: CGCFAM_00621
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003838_15 | MGYG000003838_15_14 | 13925 | 14857 | + | 3.A.1.105.9 |
| pfam | MGYG000003838_15 | MGYG000003838_15_15 | 14871 | 16010 | + | ABC2_membrane | ABC2_membrane_3 |
| pfam | MGYG000003838_15 | MGYG000003838_15_16 | 15997 | 17211 | + | ABC2_membrane_3 |
| CAZyme | MGYG000003838_15 | MGYG000003838_15_17 | 17416 | 18927 | - | GH10 |
| pfam | MGYG000003838_15 | MGYG000003838_15_18 | 19168 | 19851 | - | AlkZ-rel |
| TC | MGYG000003838_15 | MGYG000003838_15_19 | 20138 | 21907 | - | 3.A.1.135.5 |
| TC | MGYG000003838_15 | MGYG000003838_15_20 | 21900 | 23615 | - | 3.A.1.135.5 |
Gene ID: MGYG000003838_15_14
Type: TC
Location: 13925 - 14857 (+)
Type: TC
Location: 13925 - 14857 (+)
Gene ID: MGYG000003838_15_15
Type: pfam
Location: 14871 - 16010 (+)
Type: pfam
Location: 14871 - 16010 (+)
Gene ID: MGYG000003838_15_16
Type: pfam
Location: 15997 - 17211 (+)
Type: pfam
Location: 15997 - 17211 (+)
Gene ID: MGYG000003838_15_17
Type: CAZyme
Location: 17416 - 18927 (-)
Type: CAZyme
Location: 17416 - 18927 (-)
Gene ID: MGYG000003838_15_18
Type: pfam
Location: 19168 - 19851 (-)
Type: pfam
Location: 19168 - 19851 (-)
Gene ID: MGYG000003838_15_19
Type: TC
Location: 20138 - 21907 (-)
Type: TC
Location: 20138 - 21907 (-)
Gene ID: MGYG000003838_15_20
Type: TC
Location: 21900 - 23615 (-)
Type: TC
Location: 21900 - 23615 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Metaruminococcus_A
Species
Metaruminococcus_A sp003150405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.