Cluster: MGYG000003838_CGC14
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003838
- CGC Family ID: CGCFAM_00992
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003838_3 | MGYG000003838_3_154 | 151283 | 152677 | - | GH25 |
| TC | MGYG000003838_3 | MGYG000003838_3_155 | 152658 | 153098 | - | 1.E.19.1.11 |
| pfam | MGYG000003838_3 | MGYG000003838_3_156 | 153345 | 154268 | - | Acyl_transf_1 |
| CAZyme | MGYG000003838_3 | MGYG000003838_3_157 | 154284 | 155138 | - | GT27 |
| CAZyme | MGYG000003838_3 | MGYG000003838_3_158 | 155165 | 156094 | - | GT2 |
| pfam | MGYG000003838_3 | MGYG000003838_3_159 | 156109 | 156498 | - | DUF2304 |
| CAZyme | MGYG000003838_3 | MGYG000003838_3_160 | 156495 | 157211 | - | GT2 |
| CAZyme | MGYG000003838_3 | MGYG000003838_3_161 | 157271 | 158065 | - | GT2 |
| pfam | MGYG000003838_3 | MGYG000003838_3_162 | 158088 | 159494 | - | DUF2142 |
| CAZyme | MGYG000003838_3 | MGYG000003838_3_163 | 159497 | 161713 | - | GT4 | GT4 |
| TC | MGYG000003838_3 | MGYG000003838_3_164 | 161738 | 162472 | - | 3.A.1.103.1 |
| TC | MGYG000003838_3 | MGYG000003838_3_165 | 162484 | 163254 | - | 3.A.1.103.1 |
Gene ID: MGYG000003838_3_154
Type: CAZyme
Location: 151283 - 152677 (-)
Type: CAZyme
Location: 151283 - 152677 (-)
Gene ID: MGYG000003838_3_155
Type: TC
Location: 152658 - 153098 (-)
Type: TC
Location: 152658 - 153098 (-)
Gene ID: MGYG000003838_3_156
Type: pfam
Location: 153345 - 154268 (-)
Type: pfam
Location: 153345 - 154268 (-)
Gene ID: MGYG000003838_3_157
Type: CAZyme
Location: 154284 - 155138 (-)
Type: CAZyme
Location: 154284 - 155138 (-)
Gene ID: MGYG000003838_3_158
Type: CAZyme
Location: 155165 - 156094 (-)
Type: CAZyme
Location: 155165 - 156094 (-)
Gene ID: MGYG000003838_3_159
Type: pfam
Location: 156109 - 156498 (-)
Type: pfam
Location: 156109 - 156498 (-)
Gene ID: MGYG000003838_3_160
Type: CAZyme
Location: 156495 - 157211 (-)
Type: CAZyme
Location: 156495 - 157211 (-)
Gene ID: MGYG000003838_3_161
Type: CAZyme
Location: 157271 - 158065 (-)
Type: CAZyme
Location: 157271 - 158065 (-)
Gene ID: MGYG000003838_3_162
Type: pfam
Location: 158088 - 159494 (-)
Type: pfam
Location: 158088 - 159494 (-)
Gene ID: MGYG000003838_3_163
Type: CAZyme
Location: 159497 - 161713 (-)
Type: CAZyme
Location: 159497 - 161713 (-)
Gene ID: MGYG000003838_3_164
Type: TC
Location: 161738 - 162472 (-)
Type: TC
Location: 161738 - 162472 (-)
Gene ID: MGYG000003838_3_165
Type: TC
Location: 162484 - 163254 (-)
Type: TC
Location: 162484 - 163254 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Metaruminococcus_A
Species
Metaruminococcus_A sp003150405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.