Cluster: MGYG000003827_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003827
- CGC Family ID: CGCFAM_06216
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003827_5 | MGYG000003827_5_38 | 41490 | 42317 | + | GH24 |
| NULL(UNKNOWN) | MGYG000003827_5 | MGYG000003827_5_39 | 42382 | 43239 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003827_5 | MGYG000003827_5_40 | 43384 | 44544 | + | CE9 |
| pfam | MGYG000003827_5 | MGYG000003827_5_41 | 44541 | 45335 | + | Glucosamine_iso |
| pfam | MGYG000003827_5 | MGYG000003827_5_42 | 45457 | 46500 | + | UPF0004 | Radical_SAM |
| TC | MGYG000003827_5 | MGYG000003827_5_43 | 46493 | 47410 | + | 3.A.5.1.1 |
Gene ID: MGYG000003827_5_38
Type: CAZyme
Location: 41490 - 42317 (+)
Type: CAZyme
Location: 41490 - 42317 (+)
Gene ID: MGYG000003827_5_39
Type:
Location: 42382 - 43239 (+)
Type:
Location: 42382 - 43239 (+)
Gene ID: MGYG000003827_5_40
Type: CAZyme
Location: 43384 - 44544 (+)
Type: CAZyme
Location: 43384 - 44544 (+)
Gene ID: MGYG000003827_5_41
Type: pfam
Location: 44541 - 45335 (+)
Type: pfam
Location: 44541 - 45335 (+)
Gene ID: MGYG000003827_5_42
Type: pfam
Location: 45457 - 46500 (+)
Type: pfam
Location: 45457 - 46500 (+)
Gene ID: MGYG000003827_5_43
Type: TC
Location: 46493 - 47410 (+)
Type: TC
Location: 46493 - 47410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp900539605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.