Cluster: MGYG000003827_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003827
- CGC Family ID: CGCFAM_00407
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003827_5 | MGYG000003827_5_11 | 11076 | 12215 | - | GT28 |
| TC | MGYG000003827_5 | MGYG000003827_5_12 | 12205 | 13335 | - | 2.A.103.1.1 |
| TC | MGYG000003827_5 | MGYG000003827_5_13 | 13349 | 14398 | - | 9.B.146.1.6 |
| TC | MGYG000003827_5 | MGYG000003827_5_14 | 14562 | 15710 | + | 2.A.6.2.44 |
| TC | MGYG000003827_5 | MGYG000003827_5_15 | 15710 | 18889 | + | 2.A.6.2.16 |
| TC | MGYG000003827_5 | MGYG000003827_5_16 | 18882 | 20279 | + | 3.A.1.105.4 |
Gene ID: MGYG000003827_5_11
Type: CAZyme
Location: 11076 - 12215 (-)
Type: CAZyme
Location: 11076 - 12215 (-)
Gene ID: MGYG000003827_5_12
Type: TC
Location: 12205 - 13335 (-)
Type: TC
Location: 12205 - 13335 (-)
Gene ID: MGYG000003827_5_13
Type: TC
Location: 13349 - 14398 (-)
Type: TC
Location: 13349 - 14398 (-)
Gene ID: MGYG000003827_5_14
Type: TC
Location: 14562 - 15710 (+)
Type: TC
Location: 14562 - 15710 (+)
Gene ID: MGYG000003827_5_15
Type: TC
Location: 15710 - 18889 (+)
Type: TC
Location: 15710 - 18889 (+)
Gene ID: MGYG000003827_5_16
Type: TC
Location: 18882 - 20279 (+)
Type: TC
Location: 18882 - 20279 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp900539605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.