Cluster: MGYG000003827_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003827
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003827_3 | MGYG000003827_3_44 | 39018 | 39977 | + | GT2 |
| CAZyme | MGYG000003827_3 | MGYG000003827_3_45 | 39993 | 40886 | + | GT2 |
| STP | MGYG000003827_3 | MGYG000003827_3_46 | 40879 | 43266 | + | Fer4 | Fer4 |
| pfam | MGYG000003827_3 | MGYG000003827_3_47 | 43340 | 43801 | - | CTP_transf_like |
| TC | MGYG000003827_3 | MGYG000003827_3_48 | 43873 | 44928 | - | 9.A.40.2.2 |
Gene ID: MGYG000003827_3_44
Type: CAZyme
Location: 39018 - 39977 (+)
Type: CAZyme
Location: 39018 - 39977 (+)
Gene ID: MGYG000003827_3_45
Type: CAZyme
Location: 39993 - 40886 (+)
Type: CAZyme
Location: 39993 - 40886 (+)
Gene ID: MGYG000003827_3_46
Type: STP
Location: 40879 - 43266 (+)
Type: STP
Location: 40879 - 43266 (+)
Gene ID: MGYG000003827_3_47
Type: pfam
Location: 43340 - 43801 (-)
Type: pfam
Location: 43340 - 43801 (-)
Gene ID: MGYG000003827_3_48
Type: TC
Location: 43873 - 44928 (-)
Type: TC
Location: 43873 - 44928 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp900539605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.