Cluster: MGYG000003827_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003827
- CGC Family ID: CGCFAM_02201
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003827_27 | MGYG000003827_27_1 | 169 | 1098 | - | GT2 |
| pfam | MGYG000003827_27 | MGYG000003827_27_2 | 1126 | 2181 | - | DUF2155 |
| pfam | MGYG000003827_27 | MGYG000003827_27_3 | 2171 | 2623 | - | MlaD |
| TC | MGYG000003827_27 | MGYG000003827_27_4 | 2620 | 3117 | - | 3.A.1.27.3 |
| TC | MGYG000003827_27 | MGYG000003827_27_5 | 3315 | 4052 | + | 3.A.1.147.2 |
| TC | MGYG000003827_27 | MGYG000003827_27_6 | 4055 | 4786 | + | 3.A.1.132.4 |
Gene ID: MGYG000003827_27_1
Type: CAZyme
Location: 169 - 1098 (-)
Type: CAZyme
Location: 169 - 1098 (-)
Gene ID: MGYG000003827_27_2
Type: pfam
Location: 1126 - 2181 (-)
Type: pfam
Location: 1126 - 2181 (-)
Gene ID: MGYG000003827_27_3
Type: pfam
Location: 2171 - 2623 (-)
Type: pfam
Location: 2171 - 2623 (-)
Gene ID: MGYG000003827_27_4
Type: TC
Location: 2620 - 3117 (-)
Type: TC
Location: 2620 - 3117 (-)
Gene ID: MGYG000003827_27_5
Type: TC
Location: 3315 - 4052 (+)
Type: TC
Location: 3315 - 4052 (+)
Gene ID: MGYG000003827_27_6
Type: TC
Location: 4055 - 4786 (+)
Type: TC
Location: 4055 - 4786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp900539605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.