Cluster: MGYG000003806_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003806
- CGC Family ID: CGCFAM_00503
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003806_6 | MGYG000003806_6_3 | 1842 | 3149 | + | GT4 |
| NULL(UNKNOWN) | MGYG000003806_6 | MGYG000003806_6_4 | 3171 | 3755 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003806_6 | MGYG000003806_6_5 | 3752 | 5842 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003806_6 | MGYG000003806_6_6 | 5978 | 6169 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003806_6 | MGYG000003806_6_7 | 6403 | 6852 | + | ABC2_membrane |
| TC | MGYG000003806_6 | MGYG000003806_6_8 | 6836 | 7783 | + | 3.A.1.104.1 |
| NULL(UNKNOWN) | MGYG000003806_6 | MGYG000003806_6_9 | 7886 | 8800 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003806_6 | MGYG000003806_6_10 | 8797 | 10980 | + | GT4 | GT4 |
| pfam | MGYG000003806_6 | MGYG000003806_6_11 | 11178 | 13676 | + | Glyco_trans_1_2 |
| CAZyme | MGYG000003806_6 | MGYG000003806_6_12 | 13689 | 15641 | + | GT2 |
Gene ID: MGYG000003806_6_3
Type: CAZyme
Location: 1842 - 3149 (+)
Type: CAZyme
Location: 1842 - 3149 (+)
Gene ID: MGYG000003806_6_4
Type:
Location: 3171 - 3755 (+)
Type:
Location: 3171 - 3755 (+)
Gene ID: MGYG000003806_6_5
Type: CAZyme
Location: 3752 - 5842 (+)
Type: CAZyme
Location: 3752 - 5842 (+)
Gene ID: MGYG000003806_6_6
Type:
Location: 5978 - 6169 (+)
Type:
Location: 5978 - 6169 (+)
Gene ID: MGYG000003806_6_7
Type: pfam
Location: 6403 - 6852 (+)
Type: pfam
Location: 6403 - 6852 (+)
Gene ID: MGYG000003806_6_8
Type: TC
Location: 6836 - 7783 (+)
Type: TC
Location: 6836 - 7783 (+)
Gene ID: MGYG000003806_6_9
Type:
Location: 7886 - 8800 (+)
Type:
Location: 7886 - 8800 (+)
Gene ID: MGYG000003806_6_10
Type: CAZyme
Location: 8797 - 10980 (+)
Type: CAZyme
Location: 8797 - 10980 (+)
Gene ID: MGYG000003806_6_11
Type: pfam
Location: 11178 - 13676 (+)
Type: pfam
Location: 11178 - 13676 (+)
Gene ID: MGYG000003806_6_12
Type: CAZyme
Location: 13689 - 15641 (+)
Type: CAZyme
Location: 13689 - 15641 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp902489365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.