Cluster: MGYG000003806_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003806
- CGC Family ID: CGCFAM_03685
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003806_34 | MGYG000003806_34_10 | 12122 | 12970 | - | 3.A.1.105.8 |
| CAZyme | MGYG000003806_34 | MGYG000003806_34_11 | 13022 | 15034 | + | GH13_3 |
| CAZyme | MGYG000003806_34 | MGYG000003806_34_12 | 15120 | 17261 | + | CBM48 | GH13_9 |
| pfam | MGYG000003806_34 | MGYG000003806_34_13 | 17411 | 17809 | - | LMWPc |
| TC | MGYG000003806_34 | MGYG000003806_34_14 | 17857 | 19434 | - | 3.A.1.5.35 |
Gene ID: MGYG000003806_34_10
Type: TC
Location: 12122 - 12970 (-)
Type: TC
Location: 12122 - 12970 (-)
Gene ID: MGYG000003806_34_11
Type: CAZyme
Location: 13022 - 15034 (+)
Type: CAZyme
Location: 13022 - 15034 (+)
Gene ID: MGYG000003806_34_12
Type: CAZyme
Location: 15120 - 17261 (+)
Type: CAZyme
Location: 15120 - 17261 (+)
Gene ID: MGYG000003806_34_13
Type: pfam
Location: 17411 - 17809 (-)
Type: pfam
Location: 17411 - 17809 (-)
Gene ID: MGYG000003806_34_14
Type: TC
Location: 17857 - 19434 (-)
Type: TC
Location: 17857 - 19434 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp902489365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.