Cluster: MGYG000003806_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003806
- CGC Family ID: CGCFAM_04060
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003806_26 | MGYG000003806_26_22 | 18631 | 19626 | + | 3.A.1.1.23 |
| TC | MGYG000003806_26 | MGYG000003806_26_23 | 19747 | 21036 | + | 3.A.1.1.41 |
| TC | MGYG000003806_26 | MGYG000003806_26_24 | 21207 | 22184 | + | 3.A.1.1.19 |
| TC | MGYG000003806_26 | MGYG000003806_26_25 | 22181 | 23002 | + | 3.A.1.1.31 |
| NULL(UNKNOWN) | MGYG000003806_26 | MGYG000003806_26_26 | 23002 | 23187 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003806_26 | MGYG000003806_26_27 | 23184 | 24686 | + | GH13_16 |
| NULL(UNKNOWN) | MGYG000003806_26 | MGYG000003806_26_28 | 24848 | 25120 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003806_26 | MGYG000003806_26_29 | 25199 | 25315 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003806_26 | MGYG000003806_26_30 | 25348 | 26961 | + | 3.B.1.1.5 |
| TC | MGYG000003806_26 | MGYG000003806_26_31 | 27021 | 28352 | + | 3.B.1.1.5 |
Gene ID: MGYG000003806_26_22
Type: TC
Location: 18631 - 19626 (+)
Type: TC
Location: 18631 - 19626 (+)
Gene ID: MGYG000003806_26_23
Type: TC
Location: 19747 - 21036 (+)
Type: TC
Location: 19747 - 21036 (+)
Gene ID: MGYG000003806_26_24
Type: TC
Location: 21207 - 22184 (+)
Type: TC
Location: 21207 - 22184 (+)
Gene ID: MGYG000003806_26_25
Type: TC
Location: 22181 - 23002 (+)
Type: TC
Location: 22181 - 23002 (+)
Gene ID: MGYG000003806_26_26
Type:
Location: 23002 - 23187 (+)
Type:
Location: 23002 - 23187 (+)
Gene ID: MGYG000003806_26_27
Type: CAZyme
Location: 23184 - 24686 (+)
Type: CAZyme
Location: 23184 - 24686 (+)
Gene ID: MGYG000003806_26_28
Type:
Location: 24848 - 25120 (+)
Type:
Location: 24848 - 25120 (+)
Gene ID: MGYG000003806_26_29
Type:
Location: 25199 - 25315 (-)
Type:
Location: 25199 - 25315 (-)
Gene ID: MGYG000003806_26_30
Type: TC
Location: 25348 - 26961 (+)
Type: TC
Location: 25348 - 26961 (+)
Gene ID: MGYG000003806_26_31
Type: TC
Location: 27021 - 28352 (+)
Type: TC
Location: 27021 - 28352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp902489365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.