Cluster: MGYG000003805_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003805
- CGC Family ID: CGCFAM_03577
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003805_4 | MGYG000003805_4_16 | 10795 | 12198 | - | GT20 |
| NULL(UNKNOWN) | MGYG000003805_4 | MGYG000003805_4_17 | 12201 | 12632 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003805_4 | MGYG000003805_4_18 | 12679 | 14274 | - | 2.A.79.1.1 |
| TF | MGYG000003805_4 | MGYG000003805_4_19 | 14431 | 15138 | + | Trans_reg_C |
| TC | MGYG000003805_4 | MGYG000003805_4_20 | 15139 | 16524 | + | 2.A.21.9.1 |
Gene ID: MGYG000003805_4_16
Type: CAZyme
Location: 10795 - 12198 (-)
Type: CAZyme
Location: 10795 - 12198 (-)
Gene ID: MGYG000003805_4_17
Type:
Location: 12201 - 12632 (-)
Type:
Location: 12201 - 12632 (-)
Gene ID: MGYG000003805_4_18
Type: TC
Location: 12679 - 14274 (-)
Type: TC
Location: 12679 - 14274 (-)
Gene ID: MGYG000003805_4_19
Type: TF
Location: 14431 - 15138 (+)
Type: TF
Location: 14431 - 15138 (+)
Gene ID: MGYG000003805_4_20
Type: TC
Location: 15139 - 16524 (+)
Type: TC
Location: 15139 - 16524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp943913645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.